RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 ZXDBP98169 803 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 GUCY2DQ02846 1103 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 XRCC4Q13426 336 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 EIF4EBP2Q13542 120 aaPredicted RBP11.68□□□□□ -0.54
PTPN18-212ENST00000483617 CUL1Q13616 776 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 SIX1Q15475 284 aaPredicted RBP11.68□□□□□ -0.54
PTPN18-212ENST00000483617 RABGAP1LQ5R372 815 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 NAIF1Q69YI7 327 aaPredicted RBP11.68□□□□□ -0.54
PTPN18-212ENST00000483617 PKN3Q6P5Z2 889 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 PRR23BQ6ZRT6 265 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 ATG4AQ8WYN0 398 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 SLCO2A1Q92959 643 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 P2RY13Q9BPV8 354 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 BRD8Q9H0E9 1235 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 RETREG1Q9H6L5 497 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 FAM114A2Q9NRY5 505 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 ASIC3Q9UHC3 531 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 GMEB2Q9UKD1 530 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 RAB23Q9ULC3 237 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 CPQQ9Y646 472 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 DMXL1Q9Y485 3027 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 WDR87Q6ZQQ6 2873 aa11.68□□□□□ -0.54
PTPN18-212ENST00000483617 E9PAM4 449 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 TTI1O43156 1089 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 ACSL4O60488 711 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 ATG13O75143 517 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 RNF40O75150 1001 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 IGLV3-27P01718 113 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 RBP3P10745 1247 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 IRF1P10914 325 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 ERCC2P18074 760 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 IL4RP24394 825 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 GALK1P51570 392 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 NR1H3Q13133 447 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 CALCOCO2Q13137 446 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 SEMA3BQ13214 749 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 AUHQ13825 339 aaKnown RBP11.67□□□□□ -0.54
PTPN18-212ENST00000483617 DPYSQ14117 519 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 SIM2Q14190 667 aaPredicted RBP11.67□□□□□ -0.54
PTPN18-212ENST00000483617 BRD3Q15059 726 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 NOMO1Q15155 1222 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 LPAL2Q16609 132 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 FBXO43Q4G163 708 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 HEATR6Q6AI08 1181 aaKnown RBP11.67□□□□□ -0.54
PTPN18-212ENST00000483617 LAIR1Q6GTX8 287 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 C4orf22Q6V702 233 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 WDR5BQ86VZ2 330 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 JAMLQ86YT9 394 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 LRRC49Q8IUZ0 686 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 CCDC117Q8IWD4 279 aaPredicted RBP11.67□□□□□ -0.54
PTPN18-212ENST00000483617 PQLC3Q8N755 202 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 KIAA1958Q8N8K9 716 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 BBOF1Q8ND07 529 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.67□□□□□ -0.54
PTPN18-212ENST00000483617 LRRC45Q96CN5 670 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 RMDN1Q96DB5 314 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 RPRD1AQ96P16 312 aaPredicted RBP11.67□□□□□ -0.54
PTPN18-212ENST00000483617 ERP44Q9BS26 406 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 PARD6BQ9BYG5 372 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 FAM129AQ9BZQ8 928 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 ZYG11BQ9C0D3 744 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 RNF38Q9H0F5 515 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 EPB41L5Q9HCM4 733 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 FBRSL1Q9HCM7 1045 aaKnown RBP11.67□□□□□ -0.54
PTPN18-212ENST00000483617 TMPRSS4Q9NRS4 437 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 SMPD4Q9NXE4 827 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 PPARGC1AQ9UBK2 798 aaKnown RBP11.67□□□□□ -0.54
PTPN18-212ENST00000483617 DNPEPQ9ULA0 475 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 R3HDM2Q9Y2K5 976 aaKnown RBP11.67□□□□□ -0.54
PTPN18-212ENST00000483617 SH3BP1Q9Y3L3 701 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 HS3ST4Q9Y661 456 aa11.67□□□□□ -0.54
PTPN18-212ENST00000483617 FAM72CH0Y354 149 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 MTSS1O43312 755 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 HRO43593 1189 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 STC2O76061 302 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 RHOQP17081 205 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 TACR2P21452 398 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 CORO1AP31146 461 aaKnown RBP11.66□□□□□ -0.54
PTPN18-212ENST00000483617 HOXC13P31276 330 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 ADCY8P40145 1251 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 KCNJ1P48048 391 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 FOXK2Q01167 660 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 SLC7A5Q01650 507 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 SRSF5Q13243 272 aaKnown RBP11.66□□□□□ -0.54
PTPN18-212ENST00000483617 HLTFQ14527 1009 aaKnown RBP eCLIP11.66□□□□□ -0.54
PTPN18-212ENST00000483617 PAFAH1B3Q15102 231 aaKnown RBP11.66□□□□□ -0.54
PTPN18-212ENST00000483617 MS4A13Q5J8X5 152 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 ADGRF1Q5T601 910 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 FAM72AQ5TYM5 149 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 TTC39BQ5VTQ0 682 aaPredicted RBP11.66□□□□□ -0.54
PTPN18-212ENST00000483617 RAP1GAP2Q684P5 730 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 FAM72DQ6L9T8 149 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 WDR93Q6P2C0 686 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 ERMP1Q7Z2K6 904 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 ANKS1BQ7Z6G8 1248 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 ZC3H18Q86VM9 953 aaKnown RBP11.66□□□□□ -0.54
PTPN18-212ENST00000483617 FAM72BQ86X60 149 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 DENND1CQ8IV53 801 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 CCNYQ8ND76 341 aa11.66□□□□□ -0.54
PTPN18-212ENST00000483617 SLC35B2Q8TB61 432 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms