RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 HADHAP40939 763 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 PPP3CCP48454 512 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 PAPOLAP51003 745 aaKnown RBP12.16□□□□□ -0.46
SND1-210ENST00000483503 CSE1LP55060 971 aaKnown RBP12.16□□□□□ -0.46
SND1-210ENST00000483503 YBEYP58557 167 aaPredicted RBP12.16□□□□□ -0.46
SND1-210ENST00000483503 MPP3Q13368 585 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 HNRNPDQ14103 355 aaKnown RBP12.16□□□□□ -0.46
SND1-210ENST00000483503 ZKSCAN8Q15776 578 aaPredicted RBP12.16□□□□□ -0.46
SND1-210ENST00000483503 PARP15Q460N3 678 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 TRIM60Q495X7 471 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 ANKRD20A4Q4UJ75 823 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 SPOUT1Q5T280 376 aaKnown RBP12.16□□□□□ -0.46
SND1-210ENST00000483503 SNX30Q5VWJ9 437 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 ATG16L1Q676U5 607 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 KLHDC10Q6PID8 442 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 PACS1Q6VY07 963 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 TRPM8Q7Z2W7 1104 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 C14orf80Q86SX3 495 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 ZNF683Q8IZ20 524 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 TTC9BQ8N6N2 239 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 ANKLE1Q8NAG6 615 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 STKLD1Q8NE28 680 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 GABPB2Q8TAK5 448 aaPredicted RBP12.16□□□□□ -0.46
SND1-210ENST00000483503 CCT6BQ92526 530 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 ZNF669Q96BR6 464 aaPredicted RBP12.16□□□□□ -0.46
SND1-210ENST00000483503 B3GALT6Q96L58 329 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 ZNF558Q96NG5 402 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 SRPK1Q96SB4 655 aaKnown RBP12.16□□□□□ -0.46
SND1-210ENST00000483503 KLF6Q99612 283 aaPredicted RBP12.16□□□□□ -0.46
SND1-210ENST00000483503 GORASP1Q9BQQ3 440 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 CWH43Q9H720 699 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 MANSC1Q9H8J5 431 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 MRM3Q9HC36 420 aaKnown RBP12.16□□□□□ -0.46
SND1-210ENST00000483503 TMEM39AQ9NV64 488 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 RBM22Q9NW64 420 aaKnown RBP eCLIP12.16□□□□□ -0.46
SND1-210ENST00000483503 DNMT3LQ9UJW3 386 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 TBX21Q9UL17 535 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 SOX13Q9UN79 622 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 PLLPQ9Y342 182 aa12.16□□□□□ -0.46
SND1-210ENST00000483503 MICAL3Q7RTP6 2002 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 KLF11O14901 512 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 BIRC5O15392 142 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 TLR5O60602 858 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 RFPL1O75677 317 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 PIAS1O75925 651 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 UPP2O95045 317 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 VNN2O95498 520 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 IL1BP01584 269 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 SOD2P04179 222 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 LAG3P18627 525 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 ADRA1DP25100 572 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 OR1D2P34982 312 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 ETV4P43268 484 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 SLC11A2P49281 568 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 CRADDP78560 199 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 TNK2Q07912 1038 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 CCDC15Q0P6D6 951 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 INSCQ1MX18 579 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 PCID2Q5JVF3 399 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 ARTNQ5T4W7 220 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 MROH9Q5TGP6 573 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 RASIP1Q5U651 963 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 PDPK2PQ6A1A2 396 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 POTEHQ6S545 545 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 PRSS55Q6UWB4 352 aaPredicted RBP12.15□□□□□ -0.46
SND1-210ENST00000483503 RSPO2Q6UXX9 243 aaPredicted RBP12.15□□□□□ -0.46
SND1-210ENST00000483503 KYAT3Q6YP21 454 aaKnown RBP12.15□□□□□ -0.46
SND1-210ENST00000483503 TAS1R1Q7RTX1 841 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 CCDC91Q7Z6B0 441 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 MIB1Q86YT6 1006 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 RNF168Q8IYW5 571 aaPredicted RBP12.15□□□□□ -0.46
SND1-210ENST00000483503 NDUFAF2Q8N183 169 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 CNTD1Q8N815 330 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 PPHLN1Q8NEY8 458 aaKnown RBP12.15□□□□□ -0.46
SND1-210ENST00000483503 GPR152Q8TDT2 470 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 USP33Q8TEY7 942 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 AZIN2Q96A70 460 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 FAM111AQ96PZ2 611 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 HERC2P3Q9BVR0 1158 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 KIFC1Q9BW19 673 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 PRKD2Q9BZL6 878 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 SLC25A51Q9H1U9 297 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 SP110Q9HB58 689 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 VPS45Q9NRW7 570 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 TRPM5Q9NZQ8 1165 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 MPP6Q9NZW5 540 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 SLC17A7Q9P2U7 560 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 PRKAG3Q9UGI9 489 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 DCDC2Q9UHG0 476 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 GRID1Q9ULK0 1009 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 USH1CQ9Y6N9 552 aa12.15□□□□□ -0.46
SND1-210ENST00000483503 NUP205Q92621 2012 aa12.15□□□□□ -0.47
SND1-210ENST00000483503 TET1Q8NFU7 2136 aa12.14□□□□□ -0.47
SND1-210ENST00000483503 F5H5T6 163 aa12.14□□□□□ -0.47
SND1-210ENST00000483503 TIMM44O43615 452 aa12.14□□□□□ -0.47
SND1-210ENST00000483503 RAMP2O60895 175 aa12.14□□□□□ -0.47
SND1-210ENST00000483503 GLRA3O75311 464 aa12.14□□□□□ -0.47
SND1-210ENST00000483503 SOAT2O75908 522 aa12.14□□□□□ -0.47
SND1-210ENST00000483503 DCTN3O75935 186 aa12.14□□□□□ -0.47
SND1-210ENST00000483503 MYCP01106 439 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms