RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 VSIG1Q86XK7 387 aa16.65■□□□□ 0.26
COL2A1-206ENST00000483376 TMPRSS6Q8IU80 811 aa16.65■□□□□ 0.26
COL2A1-206ENST00000483376 LZTR1Q8N653 840 aa16.65■□□□□ 0.26
COL2A1-206ENST00000483376 OR7D4Q8NG98 312 aa16.65■□□□□ 0.26
COL2A1-206ENST00000483376 TSC1Q92574 1164 aa16.65■□□□□ 0.26
COL2A1-206ENST00000483376 PTPRN2Q92932 1015 aa16.65■□□□□ 0.26
COL2A1-206ENST00000483376 LOXL4Q96JB6 756 aa16.65■□□□□ 0.26
COL2A1-206ENST00000483376 SPACA7Q96KW9 195 aa16.65■□□□□ 0.26
COL2A1-206ENST00000483376 CEP44Q9C0F1 390 aa16.65■□□□□ 0.26
COL2A1-206ENST00000483376 LRRC19Q9H756 370 aa16.65■□□□□ 0.26
COL2A1-206ENST00000483376 PRDM16Q9HAZ2 1276 aa16.65■□□□□ 0.26
COL2A1-206ENST00000483376 ATP13A1Q9HD20 1204 aa16.65■□□□□ 0.26
COL2A1-206ENST00000483376 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.65■□□□□ 0.26
COL2A1-206ENST00000483376 CWC15Q9P013 229 aaKnown RBP16.65■□□□□ 0.26
COL2A1-206ENST00000483376 BCCIPQ9P287 314 aaKnown RBP eCLIP16.65■□□□□ 0.26
COL2A1-206ENST00000483376 SCML1Q9UN30 329 aa16.65■□□□□ 0.26
COL2A1-206ENST00000483376 OTOGLQ3ZCN5 2332 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 PRR23AA6NEV1 266 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 ZNF487B1APH4 448 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 ALOX15BO15296 676 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 SRCP12931 536 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 GOT1P17174 413 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 ARL4AP40617 200 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 STK19P49842 368 aaPredicted RBP16.64■□□□□ 0.25
COL2A1-206ENST00000483376 ARF5P84085 180 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 SIM2Q14190 667 aaPredicted RBP16.64■□□□□ 0.25
COL2A1-206ENST00000483376 ELAVL3Q14576 367 aaKnown RBP16.64■□□□□ 0.25
COL2A1-206ENST00000483376 POLD3Q15054 466 aaPredicted RBP16.64■□□□□ 0.25
COL2A1-206ENST00000483376 SMTNL2Q2TAL5 461 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 KCNT1Q5JUK3 1230 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 PLPP6Q8IY26 295 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 TXLNBQ8N3L3 684 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 SPC24Q8NBT2 197 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 CASKIN2Q8WXE0 1202 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 PRCCQ92733 491 aaPredicted RBP16.64■□□□□ 0.25
COL2A1-206ENST00000483376 ISG20Q96AZ6 181 aaKnown RBP16.64■□□□□ 0.25
COL2A1-206ENST00000483376 SIPA1Q96FS4 1042 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 RPL10LQ96L21 214 aaKnown RBP16.64■□□□□ 0.25
COL2A1-206ENST00000483376 PHOX2BQ99453 314 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 TPSD1Q9BZJ3 242 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 GRPEL1Q9HAV7 217 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 PCDH18Q9HCL0 1135 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 ITM2CQ9NQX7 267 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 DNAI1Q9UI46 699 aa16.64■□□□□ 0.25
COL2A1-206ENST00000483376 SMG5Q9UPR3 1016 aaKnown RBP16.64■□□□□ 0.25
COL2A1-206ENST00000483376 REXO2Q9Y3B8 237 aaKnown RBP16.64■□□□□ 0.25
COL2A1-206ENST00000483376 TTC34A8MYJ7 566 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 DCLK1O15075 740 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 PJA2O43164 708 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 KDELR3O43731 214 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 SNAP91O60641 907 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 SIN3BO75182 1162 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 ERCC2P18074 760 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 ACVRL1P37023 503 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 SERPINH1P50454 418 aaKnown RBP16.63■□□□□ 0.25
COL2A1-206ENST00000483376 MESDQ14696 234 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 PDK2Q15119 407 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 PPP6R3Q5H9R7 873 aaPredicted RBP16.63■□□□□ 0.25
COL2A1-206ENST00000483376 ZNF776Q68DI1 518 aaPredicted RBP16.63■□□□□ 0.25
COL2A1-206ENST00000483376 IL31Q6EBC2 164 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 TXNRD3NBQ6F5E7 133 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 LAIR1Q6GTX8 287 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 SLC36A4Q6YBV0 504 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 CCDC112Q8NEF3 446 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 CSPG4P5Q96PW8 444 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 ZNF670Q9BS34 389 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 KLC2Q9H0B6 622 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 HPCAL4Q9UM19 191 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 EML5Q05BV3 1969 aa16.63■□□□□ 0.25
COL2A1-206ENST00000483376 RIF1Q5UIP0 2472 aaKnown RBP16.62■□□□□ 0.25
COL2A1-206ENST00000483376 ZFHX2Q9C0A1 2572 aaPredicted RBP16.62■□□□□ 0.25
COL2A1-206ENST00000483376 IGHV1OR15-9A0A0B4J2B8 117 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 GOLGA6L3A6NEY3 463 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 CBX4O00257 560 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 RNASEH1O60930 286 aaKnown RBP16.62■□□□□ 0.25
COL2A1-206ENST00000483376 CD160O95971 181 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 MT-CO1P00395 513 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 IL4RP24394 825 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 OXTRP30559 389 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 VAV2P52735 878 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 TAS2R40P59535 323 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 RPS14P62263 151 aaKnown RBP16.62■□□□□ 0.25
COL2A1-206ENST00000483376 SRSF5Q13243 272 aaKnown RBP16.62■□□□□ 0.25
COL2A1-206ENST00000483376 SERINC3Q13530 473 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 DLG2Q15700 870 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 PLK5Q496M5 336 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 INO80DQ53TQ3 878 aaPredicted RBP16.62■□□□□ 0.25
COL2A1-206ENST00000483376 C11orf63Q6NUN7 778 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 PGBD3Q8N328 593 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 PCDH20Q8N6Y1 951 aaKnown RBP16.62■□□□□ 0.25
COL2A1-206ENST00000483376 ZNF366Q8N895 744 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 ATP11CQ8NB49 1132 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 HSPH1Q92598 858 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 FAF2Q96CS3 445 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 CCDC114Q96M63 670 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 FAM129BQ96TA1 746 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 SPON2Q9BUD6 331 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 RAB23Q9ULC3 237 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 FRYLO94915 3013 aa16.62■□□□□ 0.25
COL2A1-206ENST00000483376 RASA4BC9J798 803 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms