RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 COPAP53621 1224 aa21.4■■□□□ 1.02
SEC13-217ENST00000482647 YBEYP58557 167 aaPredicted RBP21.4■■□□□ 1.02
SEC13-217ENST00000482647 C9orf64Q5T6V5 341 aa21.4■■□□□ 1.02
SEC13-217ENST00000482647 RAD9BQ6WBX8 426 aa21.4■■□□□ 1.02
SEC13-217ENST00000482647 METTL3Q86U44 580 aaKnown RBP21.4■■□□□ 1.02
SEC13-217ENST00000482647 UMODL1-AS1Q8N2C9 162 aa21.4■■□□□ 1.02
SEC13-217ENST00000482647 SH2D3CQ8N5H7 860 aa21.4■■□□□ 1.02
SEC13-217ENST00000482647 MTG2Q9H4K7 406 aa21.4■■□□□ 1.02
SEC13-217ENST00000482647 GRPEL1Q9HAV7 217 aa21.4■■□□□ 1.02
SEC13-217ENST00000482647 CWC15Q9P013 229 aaKnown RBP21.4■■□□□ 1.02
SEC13-217ENST00000482647 INVSQ9Y283 1065 aa21.4■■□□□ 1.02
SEC13-217ENST00000482647 CXorf51AA0A1B0GTR3 108 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 RNASEH1O60930 286 aaKnown RBP21.39■■□□□ 1.01
SEC13-217ENST00000482647 SIN3BO75182 1162 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 MT-CO1P00395 513 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 KRT7P08729 469 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 ACADMP11310 421 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 P2RY2P41231 377 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 NOP2P46087 812 aaKnown RBP21.39■■□□□ 1.01
SEC13-217ENST00000482647 CLCN6P51797 869 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 KRT81Q14533 505 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 DLG2Q15700 870 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 MAP7D1Q3KQU3 841 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 PARP15Q460N3 678 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 TXNRD3NBQ6F5E7 133 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 LINGO4Q6UY18 593 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 SUMF1Q8NBK3 374 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 RLN3Q8WXF3 142 aa21.39■■□□□ 1.01
SEC13-217ENST00000482647 SMG5Q9UPR3 1016 aaKnown RBP21.39■■□□□ 1.01
SEC13-217ENST00000482647 DCLK1O15075 740 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 MAP3K13O43283 966 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 KDELR3O43731 214 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 ZMPSTE24O75844 475 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 ERCC2P18074 760 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 GLDCP23378 1020 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 SLC1A1P43005 524 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 NDST2P52849 883 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 GEMIN4P57678 1058 aaKnown RBP21.38■■□□□ 1.01
SEC13-217ENST00000482647 ZBTB16Q05516 673 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 POLNQ7Z5Q5 900 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 TMEM139Q8IV31 216 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 FRS2Q8WU20 508 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 PTPRN2Q92932 1015 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 ZC3H10Q96K80 434 aaKnown RBP21.38■■□□□ 1.01
SEC13-217ENST00000482647 RSPH9Q9H1X1 276 aaPredicted RBP21.38■■□□□ 1.01
SEC13-217ENST00000482647 NOL6Q9H6R4 1146 aaKnown RBP21.38■■□□□ 1.01
SEC13-217ENST00000482647 ITM2CQ9NQX7 267 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 FRYLO94915 3013 aa21.38■■□□□ 1.01
SEC13-217ENST00000482647 A0A0A6YYK5 440 aaPredicted RBP21.37■■□□□ 1.01
SEC13-217ENST00000482647 PRR23AA6NEV1 266 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 RASA4BC9J798 803 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 RASA4O43374 803 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 C7P10643 843 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 SRCP12931 536 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 HADHBP55084 474 aaKnown RBP21.37■■□□□ 1.01
SEC13-217ENST00000482647 CDH6P55285 790 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 TAS2R40P59535 323 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 ARF5P84085 180 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 DPYSQ14117 519 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 ZNF776Q68DI1 518 aaPredicted RBP21.37■■□□□ 1.01
SEC13-217ENST00000482647 KBTBD6Q86V97 674 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 ZNF354CQ86Y25 554 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 CPNE8Q86YQ8 564 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 KCTD6Q8NC69 237 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 PCDH18Q9HCL0 1135 aa21.37■■□□□ 1.01
SEC13-217ENST00000482647 RCOR3Q9P2K3 495 aaPredicted RBP21.37■■□□□ 1.01
SEC13-217ENST00000482647 ZSCAN5CA6NGD5 496 aaPredicted RBP21.36■■□□□ 1.01
SEC13-217ENST00000482647 K7ERQ8 282 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 RHOBTB1O94844 696 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 DNTTP04053 509 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 OXTRP30559 389 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 GJC1P36383 396 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 SERPINH1P50454 418 aaKnown RBP21.36■■□□□ 1.01
SEC13-217ENST00000482647 RPS14P62263 151 aaKnown RBP21.36■■□□□ 1.01
SEC13-217ENST00000482647 ELAVL3Q14576 367 aaKnown RBP21.36■■□□□ 1.01
SEC13-217ENST00000482647 PDK2Q15119 407 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 ELF2Q15723 593 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 LPAL2Q16609 132 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 LAIR1Q6GTX8 287 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 SLC36A4Q6YBV0 504 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 ASCL5Q7RTU5 278 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 DSG4Q86SJ6 1040 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 MAP7D3Q8IWC1 876 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 STK40Q8N2I9 435 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 FAM160A2Q8N612 972 aaPredicted RBP21.36■■□□□ 1.01
SEC13-217ENST00000482647 LZTR1Q8N653 840 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 FAM71BQ8TC56 605 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 HMCESQ96FZ2 354 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 CALR3Q96L12 384 aaKnown RBP21.36■■□□□ 1.01
SEC13-217ENST00000482647 CCDC114Q96M63 670 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 CSPG4P5Q96PW8 444 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 CEP44Q9C0F1 390 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 LRRC19Q9H756 370 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 USP36Q9P275 1121 aaKnown RBP21.36■■□□□ 1.01
SEC13-217ENST00000482647 SCML1Q9UN30 329 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 CYP8B1Q9UNU6 501 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 TFR2Q9UP52 801 aa21.36■■□□□ 1.01
SEC13-217ENST00000482647 REXO2Q9Y3B8 237 aaKnown RBP21.36■■□□□ 1.01
SEC13-217ENST00000482647 SMAD6O43541 496 aaKnown RBP21.35■■□□□ 1.01
SEC13-217ENST00000482647 GFRA3O60609 400 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms