RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 VPS51Q9UID3 782 aa13.54□□□□□ -0.24
HDAC1-208ENST00000482310 SLC25A13Q9UJS0 675 aa13.54□□□□□ -0.24
HDAC1-208ENST00000482310 SLC27A6Q9Y2P4 619 aa13.54□□□□□ -0.24
HDAC1-208ENST00000482310 MRPS17Q9Y2R5 130 aaKnown RBP13.54□□□□□ -0.24
HDAC1-208ENST00000482310 KMT2EQ8IZD2 1858 aa13.54□□□□□ -0.24
HDAC1-208ENST00000482310 TCRBV7S2A1N4TA0A589 114 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 CTAGE9A4FU28 777 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 J3KR12 359 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 ZNF185O15231 689 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 FANCGO15287 622 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 BNIP3LO60238 219 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 DRD1P21728 446 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 CASQ1P31415 396 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 NDST2P52849 883 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 COPS2P61201 443 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 SLC10A2Q12908 348 aaPredicted RBP13.53□□□□□ -0.24
HDAC1-208ENST00000482310 TFDP2Q14188 446 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 PAFAH1B3Q15102 231 aaKnown RBP13.53□□□□□ -0.24
HDAC1-208ENST00000482310 SLC9A4Q6AI14 798 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 NUDT18Q6ZVK8 323 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 SUGP1Q8IWZ8 645 aaKnown RBP13.53□□□□□ -0.24
HDAC1-208ENST00000482310 UMODL1-AS1Q8N2C9 162 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 ALLCQ8N6M5 410 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.53□□□□□ -0.24
HDAC1-208ENST00000482310 ZNF513Q8N8E2 541 aaPredicted RBP13.53□□□□□ -0.24
HDAC1-208ENST00000482310 PJA1Q8NG27 643 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 RPLP0P6Q8NHW5 317 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 ALG14Q96F25 216 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 MS4A14Q96JA4 679 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 CAPZA3Q96KX2 299 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 ACOX2Q99424 681 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 MAGEH1Q9H213 219 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 LRRC19Q9H756 370 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 POLR3BQ9NW08 1133 aaPredicted RBP13.53□□□□□ -0.24
HDAC1-208ENST00000482310 ELOVL2Q9NXB9 296 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 CACNA2D2Q9NY47 1150 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 HPCAL4Q9UM19 191 aa13.53□□□□□ -0.24
HDAC1-208ENST00000482310 ZNF487B1APH4 448 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 KLF8O95600 359 aaPredicted RBP13.52□□□□□ -0.25
HDAC1-208ENST00000482310 ATP5BP06576 529 aaKnown RBP13.52□□□□□ -0.25
HDAC1-208ENST00000482310 CHRNB1P11230 501 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 HLA-EP13747 358 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 ZFXP17010 805 aaPredicted RBP13.52□□□□□ -0.25
HDAC1-208ENST00000482310 ETFBP38117 255 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 ARF5P84085 180 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 ECT2LQ008S8 904 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 SERINC3Q13530 473 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 SLC12A1Q13621 1099 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 CCINQ13939 588 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 LRRC32Q14392 662 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 DMC1Q14565 340 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 ZNF234Q14588 700 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 TAZQ16635 292 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 PARP15Q460N3 678 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 ACCSLQ4AC99 568 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 CWF19L1Q69YN2 538 aaKnown RBP13.52□□□□□ -0.25
HDAC1-208ENST00000482310 PKN3Q6P5Z2 889 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 ZNF783Q6ZMS7 281 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 KIAA0907Q7Z7F0 614 aaPredicted RBP13.52□□□□□ -0.25
HDAC1-208ENST00000482310 ZC3H18Q86VM9 953 aaKnown RBP13.52□□□□□ -0.25
HDAC1-208ENST00000482310 ZSCAN30Q86W11 494 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 CCDC105Q8IYK2 499 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 LZTR1Q8N653 840 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 DCAF4L2Q8NA75 395 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 ATP11CQ8NB49 1132 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 CCNYQ8ND76 341 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 USP33Q8TEY7 942 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 COG1Q8WTW3 980 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 UCMAQ8WVF2 138 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 P3H4Q92791 437 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 OSBPL9Q96SU4 736 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 C2orf49Q9BVC5 232 aaPredicted RBP13.52□□□□□ -0.25
HDAC1-208ENST00000482310 CARD9Q9H257 536 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 MTG2Q9H4K7 406 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 DONSONQ9NYP3 566 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 DTLQ9NZJ0 730 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 SEPT10Q9P0V9 454 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 HCN2Q9UL51 889 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 SNX12Q9UMY4 172 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 ERVW-1Q9UQF0 538 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 OR51B4Q9Y5P0 310 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 RAD54BQ9Y620 910 aa13.52□□□□□ -0.25
HDAC1-208ENST00000482310 EML5Q05BV3 1969 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 WASH3PC4AMC7 463 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 K7ERQ8 282 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 PI15O43692 258 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 TJP3O95049 919 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 MT-CO1P00395 513 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 FGGP02679 453 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 DLDP09622 509 aaKnown RBP13.51□□□□□ -0.25
HDAC1-208ENST00000482310 TGM2P21980 687 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 PRKCHP24723 683 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 TNFRSF4P43489 277 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 YBEYP58557 167 aaPredicted RBP13.51□□□□□ -0.25
HDAC1-208ENST00000482310 ST8SIA6P61647 398 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 ETF1P62495 437 aaKnown RBP13.51□□□□□ -0.25
HDAC1-208ENST00000482310 OTUD4Q01804 1114 aaKnown RBP13.51□□□□□ -0.25
HDAC1-208ENST00000482310 NHLH1Q02575 133 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 AP1B1Q10567 949 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 PTPRNQ16849 979 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms