RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 MSI1O43347 362 aaKnown RBP6.19□□□□□ -1.42
SF3B1-210ENST00000482158 USP12O75317 370 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 CELA2AP08217 269 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 CD63P08962 238 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 EPHB2P29323 1055 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 STAT1P42224 750 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 GOLGA8FQ08AF8 430 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 SIM2Q14190 667 aaPredicted RBP6.19□□□□□ -1.42
SF3B1-210ENST00000482158 SLC18A3Q16572 532 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 SLC9C1Q4G0N8 1177 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 FAM57BQ71RH2 274 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 YTHDF3Q7Z739 585 aaKnown RBP6.19□□□□□ -1.42
SF3B1-210ENST00000482158 MON1AQ86VX9 555 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 TCP11L2Q8N4U5 519 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 RAB40AQ8WXH6 277 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 SH3KBP1Q96B97 665 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 SIGLEC11Q96RL6 698 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 CD180Q99467 661 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 EYA3Q99504 573 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 SEMA4CQ9C0C4 833 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 UNC45AQ9H3U1 944 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 SEMA4BQ9NPR2 832 aaPredicted RBP6.19□□□□□ -1.42
SF3B1-210ENST00000482158 C11orf21Q9P2W6 132 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 NLKQ9UBE8 527 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 SUFUQ9UMX1 484 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 ICKQ9UPZ9 632 aa6.19□□□□□ -1.42
SF3B1-210ENST00000482158 TARSL2A2RTX5 802 aaKnown RBP6.18□□□□□ -1.42
SF3B1-210ENST00000482158 B4E171 279 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 PER2O15055 1255 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 UGDHO60701 494 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 NFATC1O95644 943 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 DDAH2O95865 285 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 HLA-DQA2P01906 255 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 CTSAP10619 480 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 HOXD9P28356 352 aaPredicted RBP6.18□□□□□ -1.42
SF3B1-210ENST00000482158 TSPAN7P41732 249 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 ARHGAP25P42331 645 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 GALNT3Q14435 633 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 NAA25Q14CX7 972 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 GPR68Q15743 365 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 SMN1Q16637 294 aaKnown RBP6.18□□□□□ -1.42
SF3B1-210ENST00000482158 MIDNQ504T8 468 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 ZNF766Q5HY98 468 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 FAM171A1Q5VUB5 890 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 SLC18B1Q6NT16 456 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 H1FNTQ75WM6 255 aaPredicted RBP6.18□□□□□ -1.42
SF3B1-210ENST00000482158 ADGRG6Q86SQ4 1221 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 ADGRF4Q8IZF3 695 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.18□□□□□ -1.42
SF3B1-210ENST00000482158 SLITRK6Q9H5Y7 841 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 EPHX3Q9H6B9 360 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 ZDHHC7Q9NXF8 308 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 ALKBH4Q9NXW9 302 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 IPO11Q9UI26 975 aaKnown RBP6.18□□□□□ -1.42
SF3B1-210ENST00000482158 UTS2RQ9UKP6 389 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 OSGIN2Q9Y236 505 aa6.18□□□□□ -1.42
SF3B1-210ENST00000482158 TRBV5-3A0A0A0MS03 114 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 GOLGA6L10A0A0M3HER8 536 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 GUCY1B2O75343 617 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 MBD4O95243 580 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 F9P00740 461 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 URODP06132 367 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 CHRM4P08173 479 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 CASP6P55212 293 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 GHRHRQ02643 423 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 PKP1Q13835 747 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 CAMK1Q14012 370 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 RPE65Q16518 533 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 C5orf22Q49AR2 442 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 ASPHD1Q5U4P2 390 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 NAA35Q5VZE5 725 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 LRIG3Q6UXM1 1119 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 RFFLQ8WZ73 363 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 FRG2BQ96QU4 278 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 PRSS22Q9GZN4 317 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 INTS2Q9H0H0 1204 aaKnown RBP6.17□□□□□ -1.42
SF3B1-210ENST00000482158 SPAG4Q9NPE6 437 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 TMEM184CQ9NVA4 438 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 BEX4Q9NWD9 120 aaPredicted RBP6.17□□□□□ -1.42
SF3B1-210ENST00000482158 SLC8A2Q9UPR5 921 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 NAALADL1Q9UQQ1 740 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 LAMP3Q9UQV4 416 aa6.17□□□□□ -1.42
SF3B1-210ENST00000482158 A0A0G2JK05 382 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 FOXO6A8MYZ6 492 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 TEX22C9J3V5 150 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 E5RJQ4 531 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 TNPO2O14787 897 aaKnown RBP6.16□□□□□ -1.42
SF3B1-210ENST00000482158 TBX18O95935 607 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 CHRNA5P30532 468 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 GPD2P43304 727 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 CPA2P48052 419 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 CYP2J2P51589 502 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 CDH15P55291 814 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 NANOS3P60323 173 aaKnown RBP6.16□□□□□ -1.42
SF3B1-210ENST00000482158 RPS13P62277 151 aaKnown RBP6.16□□□□□ -1.42
SF3B1-210ENST00000482158 RPP30P78346 268 aaKnown RBP6.16□□□□□ -1.42
SF3B1-210ENST00000482158 RALBP1Q15311 655 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 TBC1D9BQ66K14 1250 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 TTLL5Q6EMB2 1281 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 SLC22A25Q6T423 547 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms