RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ELAC1Q9H777 363 aaKnown RBP14.75□□□□□ -0.05
CHD3-211ENST00000481999 LNPEPQ9UIQ6 1025 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 DCTN4Q9UJW0 460 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 RPL26L1Q9UNX3 145 aaKnown RBP14.75□□□□□ -0.05
CHD3-211ENST00000481999 SCML2Q9UQR0 700 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 MICAL3Q7RTP6 2002 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 TRIM49D1C9J1S8 452 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 E9PAM4 449 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 TGDSO95455 350 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 CBX6O95503 412 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 CERCAMQ5T4B2 595 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 SH2D5Q6ZV89 423 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 MON1AQ86VX9 555 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 LRRC6Q86X45 466 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 DPF3Q92784 378 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 PTPRN2Q92932 1015 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 TUBB6Q9BUF5 446 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 ATXN3LQ9H3M9 355 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 ARHGEF37A1IGU5 675 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 KCNU1A8MYU2 1149 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 ATP9BO43861 1147 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 DIAPH2O60879 1101 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 STK10O94804 968 aaKnown RBP14.74□□□□□ -0.05
CHD3-211ENST00000481999 ERVK-10P10266 1014 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 PTPN4P29074 926 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 OR1D2P34982 312 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 HCAR3P49019 387 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 PGGT1BP53609 377 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 OVGP1Q12889 678 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 C10orf120Q5SQS8 335 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 MANEALQ5VSG8 457 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 TTC39BQ5VTQ0 682 aaPredicted RBP14.74□□□□□ -0.05
CHD3-211ENST00000481999 LONP2Q86WA8 852 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 SCML4Q8N228 414 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 RFWD2Q8NHY2 731 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 GSDMBQ8TAX9 411 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 ATP2A3Q93084 1043 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 ATXN7L3BQ96GX2 97 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 FUBP3Q96I24 572 aaKnown RBP eCLIP14.74□□□□□ -0.05
CHD3-211ENST00000481999 FCRL3Q96P31 734 aaPredicted RBP14.74□□□□□ -0.05
CHD3-211ENST00000481999 FAM111AQ96PZ2 611 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 TTPALQ9BTX7 342 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 ZNF180Q9UJW8 692 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 GREB1Q4ZG55 1949 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 ARHGAP42A6NI28 874 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 TRDMT1O14717 391 aaKnown RBP14.74□□□□□ -0.05
CHD3-211ENST00000481999 KRT37O76014 449 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 IL1BP01584 269 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 NEFHP12036 1026 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 YWHAQP27348 245 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 FDFT1P37268 417 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 CCNG1P51959 295 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 CLNS1AP54105 237 aaKnown RBP14.74□□□□□ -0.05
CHD3-211ENST00000481999 DEFB103AP81534 67 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 TEX44Q53QW1 395 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 LGSNQ5TDP6 509 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 C4orf22Q6V702 233 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 SPNS2Q8IVW8 549 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 FAM13CQ8NE31 585 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 FBXO22Q8NEZ5 403 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 APBB2Q92870 758 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 C8orf48Q96LL4 319 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 SLC13A1Q9BZW2 595 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 IQCGQ9H095 443 aaKnown RBP14.74□□□□□ -0.05
CHD3-211ENST00000481999 TLE6Q9H808 572 aa14.74□□□□□ -0.05
CHD3-211ENST00000481999 MTO1Q9Y2Z2 717 aaKnown RBP14.74□□□□□ -0.05
CHD3-211ENST00000481999 A0A0G2JND7 137 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 TBC1D4O60343 1298 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 GJB3O75712 270 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 PRKCHP24723 683 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 KCNQ1P51787 676 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 ARFIP2P53365 341 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 CTC1Q2NKJ3 1217 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 WASHC2DQ5SRD0 308 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 RAP1GAP2Q684P5 730 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 LRRC8BQ6P9F7 803 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 DNAAF3Q8N9W5 541 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 IGSF8Q969P0 613 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 AZIN2Q96A70 460 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 LRRC39Q96DD0 335 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 MFSD3Q96ES6 412 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 ANKRD27Q96NW4 1050 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 OSBPL2Q9H1P3 480 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 NOL6Q9H6R4 1146 aaKnown RBP14.73□□□□□ -0.05
CHD3-211ENST00000481999 RNPEPL1Q9HAU8 725 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 IGSF9Q9P2J2 1179 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 PCDHA11Q9Y5I1 949 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 COPEO14579 308 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 KLF11O14901 512 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 MAFKO60675 156 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 CAPN15O75808 1086 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 SNRPAP09012 282 aaKnown RBP14.73□□□□□ -0.05
CHD3-211ENST00000481999 GSTA2P09210 222 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 DNAJB2P25686 324 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 ALDH7A1P49419 539 aaKnown RBP14.73□□□□□ -0.05
CHD3-211ENST00000481999 TBX4P57082 545 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 GPR17Q13304 367 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 CRYMQ14894 314 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 MS4A13Q5J8X5 152 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 TTC17Q96AE7 1141 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms