RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 KLHDC7AQ5VTJ3 777 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 SMYD5Q6GMV2 418 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 DPY19L2P1Q6NXN4 242 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 TMPRSS7Q7RTY8 843 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 PRPF39Q86UA1 669 aaKnown RBP15.65■□□□□ 0.1
LIMS3-203ENST00000480744 PROSER1Q86XN7 944 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 MARCH9Q86YJ5 346 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 SH2D3CQ8N5H7 860 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 PIP4K2CQ8TBX8 421 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 C18orf8Q96DM3 657 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 CCDC86Q9H6F5 360 aaKnown RBP15.65■□□□□ 0.1
LIMS3-203ENST00000480744 ANLNQ9NQW6 1124 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 TMPRSS4Q9NRS4 437 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 SAMSN1Q9NSI8 373 aaKnown RBP15.65■□□□□ 0.1
LIMS3-203ENST00000480744 ARHGEF38Q9NXL2 777 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 TBC1D30Q9Y2I9 924 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 PAXBP1Q9Y5B6 917 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 OR51B4Q9Y5P0 310 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 COL5A1P20908 1838 aaPredicted RBP15.65■□□□□ 0.1
LIMS3-203ENST00000480744 TDRD6O60522 2096 aaKnown RBP15.64■□□□□ 0.09
LIMS3-203ENST00000480744 ANKRD11Q6UB99 2663 aaPredicted RBP15.64■□□□□ 0.09
LIMS3-203ENST00000480744 DMXL2Q8TDJ6 3036 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 A0A1W2PR77 199 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 TAF4O00268 1085 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 SLC7A4O43246 635 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 SNAP91O60641 907 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 VASPP50552 380 aaPredicted RBP15.64■□□□□ 0.09
LIMS3-203ENST00000480744 KRT83P78385 493 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 NAPEPLDQ6IQ20 393 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 LRRC31Q6UY01 552 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 TFAP2DQ7Z6R9 452 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 XYLT1Q86Y38 959 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 ATP11CQ8NB49 1132 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 MSANTD4Q8NCY6 345 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 MDM1Q8TC05 714 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 C2orf49Q9BVC5 232 aaPredicted RBP15.64■□□□□ 0.09
LIMS3-203ENST00000480744 TAB2Q9NYJ8 693 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 MPP6Q9NZW5 540 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 PPM1HQ9ULR3 514 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 TPX2Q9ULW0 747 aaKnown RBP15.64■□□□□ 0.09
LIMS3-203ENST00000480744 FARP1Q9Y4F1 1045 aaPredicted RBP15.64■□□□□ 0.09
LIMS3-203ENST00000480744 ADAMTS20P59510 1910 aa15.64■□□□□ 0.09
LIMS3-203ENST00000480744 FAM149AA5PLN7 773 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 I6L893 689 aaPredicted RBP15.63■□□□□ 0.09
LIMS3-203ENST00000480744 TLR4O00206 839 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 MCF2LO15068 1137 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 ALOX15BO15296 676 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 LATO43561 262 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 PLRG1O43660 514 aaKnown RBP15.63■□□□□ 0.09
LIMS3-203ENST00000480744 MT-CO1P00395 513 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 F9P00740 461 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 SRCP12931 536 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 UCHL3P15374 230 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 CDH5P33151 784 aaPredicted RBP15.63■□□□□ 0.09
LIMS3-203ENST00000480744 GABRB2P47870 512 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 ARRB1P49407 418 aaPredicted RBP15.63■□□□□ 0.09
LIMS3-203ENST00000480744 NXPH1P58417 271 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 SLC25A52Q3SY17 297 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 C5orf22Q49AR2 442 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 AGBL4Q5VU57 503 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 DHRS13Q6UX07 377 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 LINGO4Q6UY18 593 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 NOP9Q86U38 636 aaKnown RBP15.63■□□□□ 0.09
LIMS3-203ENST00000480744 GALNT15Q8N3T1 639 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 EID2Q8N6I1 236 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 CPA5Q8WXQ8 436 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 CNDP2Q96KP4 475 aaKnown RBP15.63■□□□□ 0.09
LIMS3-203ENST00000480744 CCDC114Q96M63 670 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 PSMB7Q99436 277 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 KDM4CQ9H3R0 1056 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 VPS51Q9UID3 782 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 LHX6Q9UPM6 363 aa15.63■□□□□ 0.09
LIMS3-203ENST00000480744 C10orf142B7Z368 130 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 E9PAM4 449 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 F8VZ95 297 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 K7ERQ8 282 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 CBX4O00257 560 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 KPNA3O00505 521 aaPredicted RBP15.62■□□□□ 0.09
LIMS3-203ENST00000480744 YKT6O15498 198 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 SRGAP2O75044 1071 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 DKK1O94907 266 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 LDOC1O95751 146 aaPredicted RBP15.62■□□□□ 0.09
LIMS3-203ENST00000480744 LSM8O95777 96 aaKnown RBP15.62■□□□□ 0.09
LIMS3-203ENST00000480744 CAPNS1P04632 268 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 MMEP08473 750 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 RRM1P23921 792 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 EPHA8P29322 1005 aaPredicted RBP15.62■□□□□ 0.09
LIMS3-203ENST00000480744 FLT3P36888 993 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 SCNN1AP37088 669 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 SHBQ15464 509 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 TCP11X2Q5H9J9 407 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 C6orf118Q5T5N4 469 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 NAA35Q5VZE5 725 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 SETD3Q86TU7 594 aaPredicted RBP15.62■□□□□ 0.09
LIMS3-203ENST00000480744 ZNF683Q8IZ20 524 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 SAP25Q8TEE9 199 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 NT5C3BQ969T7 300 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 PGAP3Q96FM1 320 aaPredicted RBP15.62■□□□□ 0.09
LIMS3-203ENST00000480744 CFAP57Q96MR6 1250 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 MYOCQ99972 504 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms