RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 RAB23Q9ULC3 237 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 STARD13Q9Y3M8 1113 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 SPEGQ15772 3267 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.54□□□□□ -0.4
TRA2B-212ENST00000480461 WASH3PC4AMC7 463 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 LRP3O75074 770 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 APODP05090 189 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 PYGMP11217 842 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 CTNNA2P26232 953 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 PMLP29590 882 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 CDKN2BP42772 138 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 SEC13P55735 322 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 DMWDQ09019 674 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 SLC10A2Q12908 348 aaPredicted RBP12.54□□□□□ -0.4
TRA2B-212ENST00000480461 CDH18Q13634 790 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 PDK2Q15119 407 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 PTPRNQ16849 979 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 PLEKHG6Q3KR16 790 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 C2orf27AQ580R0 203 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 EGFLAMQ63HQ2 1017 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 MBLAC2Q68D91 279 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 PEX26Q7Z412 305 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 SETD3Q86TU7 594 aaPredicted RBP12.54□□□□□ -0.4
TRA2B-212ENST00000480461 ARHGAP12Q8IWW6 846 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 KATNAL2Q8IYT4 538 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 UMODL1-AS1Q8N2C9 162 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 USP33Q8TEY7 942 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 CYB5D2Q8WUJ1 264 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 MYO19Q96H55 970 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 HES6Q96HZ4 224 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 MRGPRX3Q96LB0 322 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 RNF157Q96PX1 679 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 CALN1Q9BXU9 219 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 SLC39A8Q9C0K1 460 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 LRRC19Q9H756 370 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 SEMA4GQ9NTN9 838 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 AMFRQ9UKV5 643 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 ACTL7AQ9Y615 435 aa12.54□□□□□ -0.4
TRA2B-212ENST00000480461 ILVBLA1L0T0 632 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 TYW5A2RUC4 315 aaKnown RBP12.53□□□□□ -0.4
TRA2B-212ENST00000480461 LRRD1A4D1F6 860 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 H3BRJ5 948 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 NCAM2O15394 837 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 PSTPIP1O43586 416 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 GDF9O60383 454 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 SNAP91O60641 907 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 ADAM23O75077 832 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 RNF40O75150 1001 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 ZMPSTE24O75844 475 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 CD160O95971 181 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 MT-CO1P00395 513 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 RETP07949 1114 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 KRT10P13645 584 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 KCNA4P22459 653 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 HTR7P34969 479 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 TIE1P35590 1138 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 GNA12Q03113 381 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 KRT81Q14533 505 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 IFI16Q16666 785 aaKnown RBP12.53□□□□□ -0.4
TRA2B-212ENST00000480461 MEI1Q5TIA1 1274 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 DCAF12L1Q5VU92 463 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 C1orf228Q6PIY5 440 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 PRR23CQ6ZRP0 262 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 RCOR2Q8IZ40 523 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 IL17RCQ8NAC3 791 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 ARHGEF2Q92974 986 aaKnown RBP12.53□□□□□ -0.4
TRA2B-212ENST00000480461 CELF6Q96J87 481 aaKnown RBP12.53□□□□□ -0.4
TRA2B-212ENST00000480461 TLR10Q9BXR5 811 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 ACE2Q9BYF1 805 aaPredicted RBP12.53□□□□□ -0.4
TRA2B-212ENST00000480461 RETREG1Q9H6L5 497 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 KCND1Q9NSA2 647 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 SLCO3A1Q9UIG8 710 aa12.53□□□□□ -0.4
TRA2B-212ENST00000480461 MRPS17Q9Y2R5 130 aaKnown RBP12.53□□□□□ -0.4
TRA2B-212ENST00000480461 ZZEF1O43149 2961 aa12.52□□□□□ -0.4
TRA2B-212ENST00000480461 K7ERQ8 282 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 FGF10O15520 208 aaPredicted RBP12.52□□□□□ -0.41
TRA2B-212ENST00000480461 DAPK3O43293 454 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 ZSCAN12O43309 604 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 TIMM44O43615 452 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 ZRANB2O95218 330 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRA2B-212ENST00000480461 KRT1P04264 644 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 RHOCP08134 193 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 HNRNPLP14866 589 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRA2B-212ENST00000480461 ARL4AP40617 200 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 MAPKAPK2P49137 400 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 ZNF135P52742 658 aaPredicted RBP12.52□□□□□ -0.41
TRA2B-212ENST00000480461 NRLP54845 237 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 ZNF211Q13398 564 aaPredicted RBP12.52□□□□□ -0.41
TRA2B-212ENST00000480461 SLC12A1Q13621 1099 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 DGKKQ5KSL6 1271 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 C6orf118Q5T5N4 469 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 NCBP2-AS2Q69YL0 99 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 SPOCD1Q6ZMY3 1216 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 ARHGAP36Q6ZRI8 547 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 PRR23BQ6ZRT6 265 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 SYCE1Q8N0S2 351 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 AHI1Q8N157 1196 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 CCDC33Q8N5R6 958 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 ALLCQ8N6M5 410 aa12.52□□□□□ -0.41
TRA2B-212ENST00000480461 EXD1Q8NHP7 514 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms