RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 OSER1Q9NX31 292 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 AQRO60306 1485 aaKnown RBP eCLIP9.1□□□□□ -0.951e-7■■■■□ 25.7
TTC3-216ENST00000479930 GAPVD1Q14C86 1478 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 LOC100653049A0A140TA62 436 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 KRT34O76011 436 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 ADH1AP07327 375 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 TMEM253P0C7T8 217 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 KELP23276 732 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 EPHB2P29323 1055 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 ACADSBP45954 432 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 POU5F1Q01860 360 aaKnown RBP9.1□□□□□ -0.95
TTC3-216ENST00000479930 SYCE2Q6PIF2 218 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 MFSD7Q6UXD7 560 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 TSEN15Q8WW01 171 aaKnown RBP9.1□□□□□ -0.95
TTC3-216ENST00000479930 HERVK_113Q902F9 699 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 HAVCR1Q96D42 359 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 CITED4Q96RK1 184 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 MROH7-TTC4A0A0A0MT08 1334 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 MROH7Q68CQ1 1323 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 HMX3A6NHT5 357 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 VTNP04004 478 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 IFNA6P05013 189 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 MNDAP41218 407 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 AVPR1BP47901 424 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 GRIK2Q13002 908 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 C8orf34Q49A92 452 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 TRIQKQ629K1 86 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 TMPPEQ6ZT21 453 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 OR8K1Q8NGG5 319 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 HEXDCQ8WVB3 486 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 RBCK1Q9BYM8 510 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 NDST4Q9H3R1 872 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 A1CFQ9NQ94 594 aaKnown RBP9.1□□□□□ -0.95
TTC3-216ENST00000479930 RCOR1Q9UKL0 485 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 BLOC1S6Q9UL45 172 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 CXCR5P32302 372 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 FMO1Q01740 532 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 C5orf22Q49AR2 442 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 WASHC2DQ5SRD0 308 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 OR8D1Q8WZ84 308 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 PPP1R2P1Q96PQ5 205 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 CST11Q9H112 138 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 CDY2AQ9Y6F7 541 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 CDY1Q9Y6F8 540 aa9.1□□□□□ -0.95
TTC3-216ENST00000479930 GRID2IPA4D2P6 1211 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 ADH1CP00326 375 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 TSPAN19P0C672 248 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 MAT2AP31153 395 aaKnown RBP9.09□□□□□ -0.95
TTC3-216ENST00000479930 CTBP2P56545 445 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 CUL2Q13617 745 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 ARMCX4Q5H9R4 360 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 HECTD2Q5U5R9 776 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 DEFB132Q7Z7B7 95 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 SEPT1Q8WYJ6 367 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 SIPA1Q96FS4 1042 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 MAGEF1Q9HAY2 307 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 TBX1O43435 398 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 USP1O94782 785 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 PRKAR2AP13861 404 aaKnown RBP9.09□□□□□ -0.95
TTC3-216ENST00000479930 AMPD1P23109 780 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 QARSP47897 775 aaKnown RBP9.09□□□□□ -0.95
TTC3-216ENST00000479930 EFNA5P52803 228 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 DR1Q01658 176 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 COQ8BQ96D53 544 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 CCDC115Q96NT0 180 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 GREM2Q9H772 168 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 TOR4AQ9NXH8 423 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 STARD13Q9Y3M8 1113 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 ZNF726A6NNF4 738 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 ZNF500O60304 480 aaPredicted RBP9.09□□□□□ -0.95
TTC3-216ENST00000479930 THP07101 528 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 MYL12AP19105 171 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 MCAMP43121 646 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 ATF7IP2Q5U623 682 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 RP9Q8TA86 221 aaKnown RBP9.09□□□□□ -0.95
TTC3-216ENST00000479930 SF3B1O75533 1304 aaKnown RBP eCLIP9.09□□□□□ -0.953e-7■■■■■ 49.3
TTC3-216ENST00000479930 ACTL6BO94805 426 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 CRTAMO95727 393 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 SPARCP09486 303 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 GCFC2P16383 781 aaKnown RBP9.09□□□□□ -0.95
TTC3-216ENST00000479930 RRM1P23921 792 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 POLR2LP62875 67 aaKnown RBP9.09□□□□□ -0.95
TTC3-216ENST00000479930 ELAVL2Q12926 359 aaKnown RBP9.09□□□□□ -0.95
TTC3-216ENST00000479930 PPIGQ13427 754 aaKnown RBP eCLIP9.09□□□□□ -0.958e-7■■□□□ 11.7
TTC3-216ENST00000479930 BAATQ14032 418 aaPredicted RBP9.09□□□□□ -0.95
TTC3-216ENST00000479930 LGI2Q8N0V4 545 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 SH3RF3Q8TEJ3 882 aaPredicted RBP9.09□□□□□ -0.95
TTC3-216ENST00000479930 PLAAQ9Y263 795 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 TIMM13Q9Y5L4 95 aaPredicted RBP9.09□□□□□ -0.95
TTC3-216ENST00000479930 GLRBP48167 497 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 SH3PXD2AQ5TCZ1 1133 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 KIAA0319Q5VV43 1072 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 NOXRED1Q6NXP6 359 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 USP45Q70EL2 814 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 ATL1Q8WXF7 558 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 WDR77Q9BQA1 342 aaPredicted RBP9.09□□□□□ -0.95
TTC3-216ENST00000479930 EIF2B3Q9NR50 452 aaKnown RBP9.09□□□□□ -0.95
TTC3-216ENST00000479930 GPRC5DQ9NZD1 345 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 CDH9Q9ULB4 789 aa9.09□□□□□ -0.95
TTC3-216ENST00000479930 SNX7Q9UNH6 387 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms