RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 CNTN1Q12860 1018 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 SLC12A1Q13621 1099 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 ELAVL3Q14576 367 aaKnown RBP17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 ARID5BQ14865 1188 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 ARTNQ5T4W7 220 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 TTC39BQ5VTQ0 682 aaPredicted RBP17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 IL27RAQ6UWB1 636 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 SH2D3CQ8N5H7 860 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 KDM1BQ8NB78 822 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 PIP4K2CQ8TBX8 421 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 TNKS2Q9H2K2 1166 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 FANCLQ9NW38 375 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 TOR4AQ9NXH8 423 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 VPS51Q9UID3 782 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 STAP1Q9ULZ2 295 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 NEUROG3Q9Y4Z2 214 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 E9PAM4 449 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 ADH1BP00325 375 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 C5AR1P21730 350 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 PLK1P53350 603 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 CDH4P55283 916 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 FMO1Q01740 532 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 CDKAL1Q5VV42 579 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 CHST14Q8NCH0 376 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 JOSD2Q8TAC2 188 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 BAHD1Q8TBE0 780 aaPredicted RBP17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 OR8D1Q8WZ84 308 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 SERAC1Q96JX3 654 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 SPAG5Q96R06 1193 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 C11orf70Q9BRQ4 267 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 STK33Q9BYT3 514 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 ADAMTS1Q9UHI8 967 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 NOCTQ9UK39 431 aaKnown RBP17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 FZD4Q9ULV1 537 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 SCML1Q9UN30 329 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 MSRB2Q9Y3D2 182 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 DMXL2Q8TDJ6 3036 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 FREM2Q5SZK8 3169 aa17.84■□□□□ 0.45
ECHDC1-216ENST00000479525 FAM149AA5PLN7 773 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 ATP9BO43861 1147 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 CLDN11O75508 207 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 EEF1GP26641 437 aaKnown RBP17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 CCT8P50990 548 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 RACK1P63244 317 aaKnown RBP17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 SULT2A1Q06520 285 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 ZNF423Q2M1K9 1284 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 SLC25A52Q3SY17 297 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 LRSAM1Q6UWE0 723 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 DRC7Q8IY82 874 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 ATP11CQ8NB49 1132 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 ENOX1Q8TC92 643 aaKnown RBP17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 NT5C3BQ969T7 300 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 ARRDC3Q96B67 414 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 PCMTD1Q96MG8 357 aaPredicted RBP17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 PCDHB18PQ96TA0 734 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 SPON2Q9BUD6 331 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 ACE2Q9BYF1 805 aaPredicted RBP17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 TMEM59LQ9UK28 342 aa17.83■□□□□ 0.45
ECHDC1-216ENST00000479525 MYLKQ15746 1914 aa17.83■□□□□ 0.44
ECHDC1-216ENST00000479525 FLRT2O43155 660 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 ZNF883P0CG24 379 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 CD38P28907 300 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 COPB1P53618 953 aaKnown RBP17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 SNX16P57768 344 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 SHBQ15464 509 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 C5orf22Q49AR2 442 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 BRMS1LQ5PSV4 323 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 AGBL4Q5VU57 503 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 ZDHHC17Q8IUH5 632 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 NETO2Q8NC67 525 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 GRIN3AQ8TCU5 1115 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 ADAMTS14Q8WXS8 1223 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 FZD3Q9NPG1 666 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 NDFIP2Q9NV92 336 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 TBC1D30Q9Y2I9 924 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 CHD5Q8TDI0 1954 aa17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 GOLGA4Q13439 2230 aaKnown RBP17.82■□□□□ 0.44
ECHDC1-216ENST00000479525 A0A1W2PR77 199 aa17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 SRRM3A6NNA2 597 aaPredicted RBP17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 VILLO15195 856 aa17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 PRLRP16471 622 aa17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 RDXP35241 583 aaKnown RBP17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 JAM2P57087 298 aa17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 SCAPQ12770 1279 aa17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 BNIP3Q12983 259 aa17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 SYCP1Q15431 976 aa17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 LEKR1Q6ZMV7 388 aa17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 KDF1Q8NAX2 398 aaPredicted RBP17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 RXFP2Q8WXD0 754 aa17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 OSGEPQ9NPF4 335 aa17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 ARHGAP20Q9P2F6 1191 aa17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 APOBEC2Q9Y235 224 aaKnown RBP17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 SIK3Q9Y2K2 1263 aa17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 TRPM6Q9BX84 2022 aa17.81■□□□□ 0.44
ECHDC1-216ENST00000479525 FAM72CH0Y354 149 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 TAF4O00268 1085 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 KPNA3O00505 521 aaPredicted RBP17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 PLRG1O43660 514 aaKnown RBP17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 TRIM16O95361 564 aa17.8■□□□□ 0.44
ECHDC1-216ENST00000479525 OR1E1P30953 314 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms