RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 BAP1Q92560 729 aa12.34□□□□□ -0.43
GCA-208ENST00000479199 KLK6Q92876 244 aa12.34□□□□□ -0.43
GCA-208ENST00000479199 RPRD1AQ96P16 312 aaPredicted RBP12.34□□□□□ -0.43
GCA-208ENST00000479199 GTPBP4Q9BZE4 634 aaKnown RBP12.34□□□□□ -0.43
GCA-208ENST00000479199 KDM4CQ9H3R0 1056 aa12.34□□□□□ -0.43
GCA-208ENST00000479199 THAP9Q9H5L6 903 aa12.34□□□□□ -0.43
GCA-208ENST00000479199 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.34□□□□□ -0.43
GCA-208ENST00000479199 VPS28Q9UK41 221 aa12.34□□□□□ -0.43
GCA-208ENST00000479199 VANGL2Q9ULK5 521 aa12.34□□□□□ -0.43
GCA-208ENST00000479199 CLCA2Q9UQC9 943 aa12.34□□□□□ -0.43
GCA-208ENST00000479199 DMTF1Q9Y222 760 aa12.34□□□□□ -0.43
GCA-208ENST00000479199 CFAP46Q8IYW2 2715 aa12.34□□□□□ -0.43
GCA-208ENST00000479199 GOLGA6L4A6NEF3 574 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 RRP8O43159 456 aaKnown RBP12.33□□□□□ -0.44
GCA-208ENST00000479199 MED7O43513 233 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 RNGTTO60942 597 aaKnown RBP12.33□□□□□ -0.44
GCA-208ENST00000479199 GRAP2O75791 330 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 AFPP02771 609 aaKnown RBP12.33□□□□□ -0.44
GCA-208ENST00000479199 CTSLP07711 333 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 BMP6P22004 513 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 NUDT1P36639 197 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 STX17P56962 302 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 CCDC173Q0VFZ6 552 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 AUHQ13825 339 aaKnown RBP12.33□□□□□ -0.44
GCA-208ENST00000479199 STAT4Q14765 748 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 MEA1Q16626 185 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 PIP5KL1Q5T9C9 394 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 FAM46CQ5VWP2 391 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 KDM7AQ6ZMT4 941 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 ERICH1Q86X53 443 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 PASD1Q8IV76 773 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 DCBLD1Q8N8Z6 715 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 TMEM145Q8NBT3 493 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 RNF34Q969K3 372 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 SLC2A13Q96QE2 648 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 MED15Q96RN5 788 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 CPXM1Q96SM3 734 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 FEM1AQ9BSK4 669 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 UBE2TQ9NPD8 197 aaPredicted RBP12.33□□□□□ -0.44
GCA-208ENST00000479199 FZD3Q9NPG1 666 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 UCKL1Q9NWZ5 548 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 SLC12A6Q9UHW9 1150 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 PPM1HQ9ULR3 514 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 PCDHB1Q9Y5F3 818 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 OR51B4Q9Y5P0 310 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 LRRK1Q38SD2 2015 aa12.33□□□□□ -0.44
GCA-208ENST00000479199 A0A1W2PQU0 124 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 BECN2A8MW95 431 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 PPP1R3GB7ZBB8 358 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 PRAMEF26H0Y7S4 382 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 RNF103O00237 685 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 MCF2LO15068 1137 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 ALOX15BO15296 676 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 SLC31A1O15431 190 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 MAGEC1O60732 1142 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 THEGLP0DJG4 465 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 SLC2A3P11169 496 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 ZNF18P17022 549 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 CCR1P32246 355 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 VASPP50552 380 aaPredicted RBP12.32□□□□□ -0.44
GCA-208ENST00000479199 OXCT1P55809 520 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 DAB2P98082 770 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 CDK17Q00537 523 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 APBA1Q02410 837 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 C19orf57Q0VDD7 668 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 OVGP1Q12889 678 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 NME3Q13232 169 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 TBC1D25Q3MII6 688 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 OTUD1Q5VV17 481 aaPredicted RBP12.32□□□□□ -0.44
GCA-208ENST00000479199 FAM183BPQ6ZVS7 135 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 C14orf80Q86SX3 495 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 SLC25A45Q8N413 288 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 SH2D3CQ8N5H7 860 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 FGF11Q92914 225 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 ARRDC3Q96B67 414 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 KLHDC7BQ96G42 594 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 TIGD1Q96MW7 591 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 PREBQ9HCU5 417 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 HOOK1Q9UJC3 728 aaKnown RBP12.32□□□□□ -0.44
GCA-208ENST00000479199 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.32□□□□□ -0.44
GCA-208ENST00000479199 HS3ST4Q9Y661 456 aa12.32□□□□□ -0.44
GCA-208ENST00000479199 ASH1LQ9NR48 2969 aaKnown RBP12.32□□□□□ -0.44
GCA-208ENST00000479199 ATMQ13315 3056 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.31□□□□□ -0.44
GCA-208ENST00000479199 BICDL2A1A5D9 508 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 BIN1O00499 593 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 KPNA3O00505 521 aaPredicted RBP12.31□□□□□ -0.44
GCA-208ENST00000479199 SNAP91O60641 907 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 HSF2BPO75031 334 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 PAGE1O75459 146 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 DAB1O75553 588 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 CNTN5O94779 1100 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 MT-CO1P00395 513 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 MT-CO3P00414 261 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 SRCP12931 536 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 MYF5P13349 255 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 DGKAP23743 735 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 ACTN2P35609 894 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 USP8P40818 1118 aa12.31□□□□□ -0.44
GCA-208ENST00000479199 PPP1R2P41236 205 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms