RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 PCED1AQ9H1Q7 454 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 DUSP15Q9H1R2 295 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-217ENST00000479161 LUC7LQ9NQ29 371 aaKnown RBP15.85■□□□□ 0.13
C9orf3-217ENST00000479161 CTTNBP2NLQ9P2B4 639 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 RCOR3Q9P2K3 495 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-217ENST00000479161 SLCO3A1Q9UIG8 710 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 PI4KAP42356 2102 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 A0A0D9SEW6 157 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 RAMP2O60895 175 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 PROSCO94903 275 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 CYLC1P35663 651 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-217ENST00000479161 CTSOP43234 321 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-217ENST00000479161 NDST2P52849 883 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 HADHQ16836 314 aaKnown RBP15.84■□□□□ 0.13
C9orf3-217ENST00000479161 PMS2CLQ68D20 193 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 USP30Q70CQ3 517 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 PYROXD2Q8N2H3 581 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 FAM160A2Q8N612 972 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-217ENST00000479161 LZTR1Q8N653 840 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 CASKIN2Q8WXE0 1202 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 RFFLQ8WZ73 363 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 ARHGEF2Q92974 986 aaKnown RBP15.84■□□□□ 0.13
C9orf3-217ENST00000479161 MAGEB5Q9BZ81 275 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 TPSD1Q9BZJ3 242 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 CEP44Q9C0F1 390 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 DHX35Q9H5Z1 703 aaKnown RBP15.84■□□□□ 0.13
C9orf3-217ENST00000479161 VPS51Q9UID3 782 aa15.84■□□□□ 0.13
C9orf3-217ENST00000479161 IGHV1OR15-9A0A0B4J2B8 117 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 MCF2LO15068 1137 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 RNASEH1O60930 286 aaKnown RBP15.83■□□□□ 0.12
C9orf3-217ENST00000479161 HLA-EP13747 358 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 HOXD12P35452 270 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 TPI1P60174 286 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 SLC25A11Q02978 314 aaKnown RBP15.83■□□□□ 0.12
C9orf3-217ENST00000479161 SRSF5Q13243 272 aaKnown RBP15.83■□□□□ 0.12
C9orf3-217ENST00000479161 POLD3Q15054 466 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-217ENST00000479161 ZNF776Q68DI1 518 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-217ENST00000479161 POLNQ7Z5Q5 900 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 DSG4Q86SJ6 1040 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 KBTBD6Q86V97 674 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 CADM4Q8NFZ8 388 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 SLC35G2Q8TBE7 412 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 RPL10LQ96L21 214 aaKnown RBP15.83■□□□□ 0.12
C9orf3-217ENST00000479161 FAM129BQ96TA1 746 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 PACSIN1Q9BY11 444 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 ZWILCHQ9H900 591 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 ATP13A1Q9HD20 1204 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 SPTLC3Q9NUV7 552 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 NDFIP2Q9NV92 336 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 PCSK1NQ9UHG2 260 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 GMEB2Q9UKD1 530 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 HPCAL4Q9UM19 191 aa15.83■□□□□ 0.12
C9orf3-217ENST00000479161 EPN1Q9Y6I3 576 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-217ENST00000479161 TNRC6BQ9UPQ9 1833 aaKnown RBP15.82■□□□□ 0.12
C9orf3-217ENST00000479161 CACNA1EQ15878 2313 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 A0A0A6YYK5 440 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-217ENST00000479161 TTC34A8MYJ7 566 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 EEF2KO00418 725 aaKnown RBP15.82■□□□□ 0.12
C9orf3-217ENST00000479161 KDELR3O43731 214 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 CREB3O43889 395 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 SIN3BO75182 1162 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 EPN2O95208 641 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 RARAP10276 462 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 ACADMP11310 421 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 SRCP12931 536 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 IL1R2P27930 398 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 STK19P49842 368 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-217ENST00000479161 TPMTP51580 245 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 RPS14P62263 151 aaKnown RBP15.82■□□□□ 0.12
C9orf3-217ENST00000479161 SPA17Q15506 151 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 DLG2Q15700 870 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 INO80DQ53TQ3 878 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-217ENST00000479161 AFMIDQ63HM1 303 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 PRR23BQ6ZRT6 265 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 RFX8Q6ZV50 586 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 LPCAT2Q7L5N7 544 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 VSIG1Q86XK7 387 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 OR7D4Q8NG98 312 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 FAM131CQ96AQ9 280 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 CCDC114Q96M63 670 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 NOL6Q9H6R4 1146 aaKnown RBP15.82■□□□□ 0.12
C9orf3-217ENST00000479161 LRRC19Q9H756 370 aa15.82■□□□□ 0.12
C9orf3-217ENST00000479161 WSB2Q9NYS7 404 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-217ENST00000479161 MBD1Q9UIS9 605 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-217ENST00000479161 FARP1Q9Y4F1 1045 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-217ENST00000479161 ZNF487B1APH4 448 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 H3BRJ5 948 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 ADH1BP00325 375 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 KRT7P08729 469 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 C5AR1P21730 350 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 CD6P30203 668 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 ARL4AP40617 200 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 SLC1A1P43005 524 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 MAGEA1P43355 309 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 SERPINH1P50454 418 aaKnown RBP15.81■□□□□ 0.12
C9orf3-217ENST00000479161 ARF5P84085 180 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 DPYSQ14117 519 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 CA9Q16790 459 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 TTC31Q49AM3 519 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-217ENST00000479161 LRRC38Q5VT99 294 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms