RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 CSHL1Q14406 222 aa11.16□□□□□ -0.62
EWSR1-216ENST00000479135 SNAP47Q5SQN1 464 aa11.16□□□□□ -0.62
EWSR1-216ENST00000479135 DET1Q7L5Y6 550 aa11.16□□□□□ -0.62
EWSR1-216ENST00000479135 PAGE2Q7Z2X7 111 aa11.16□□□□□ -0.62
EWSR1-216ENST00000479135 FNDC5Q8NAU1 212 aa11.16□□□□□ -0.62
EWSR1-216ENST00000479135 ACAT2Q9BWD1 397 aa11.16□□□□□ -0.62
EWSR1-216ENST00000479135 EFCAB1Q9HAE3 211 aa11.16□□□□□ -0.62
EWSR1-216ENST00000479135 ABHD10Q9NUJ1 306 aa11.16□□□□□ -0.62
EWSR1-216ENST00000479135 PCDHA4Q9UN74 947 aa11.16□□□□□ -0.62
EWSR1-216ENST00000479135 MAPRE3Q9UPY8 281 aa11.16□□□□□ -0.62
EWSR1-216ENST00000479135 ADGRL1O94910 1474 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 NPHP3-ACAD11A0A0J9YXS1 232 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 SEC31BQ9NQW1 1179 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 UBP1Q9NZI7 540 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 ZNF639Q9UID6 485 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 CPNE3O75131 537 aaKnown RBP11.15□□□□□ -0.62
EWSR1-216ENST00000479135 ZBTB48P10074 688 aaPredicted RBP11.15□□□□□ -0.62
EWSR1-216ENST00000479135 ITGA4P13612 1032 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 HIRAP54198 1017 aaPredicted RBP11.15□□□□□ -0.62
EWSR1-216ENST00000479135 B3GNT6Q6ZMB0 384 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 GALNT5Q7Z7M9 940 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 DSELQ8IZU8 1212 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 OR52L1Q8NGH7 329 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 NSUN6Q8TEA1 469 aaKnown RBP11.15□□□□□ -0.62
EWSR1-216ENST00000479135 PAGE5Q96GU1 130 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 ZNF717Q9BY31 904 aaPredicted RBP11.15□□□□□ -0.62
EWSR1-216ENST00000479135 CRNNQ9UBG3 495 aaPredicted RBP11.15□□□□□ -0.62
EWSR1-216ENST00000479135 CCDC61Q9Y6R9 512 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 MED23Q9ULK4 1368 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 ATP6V1G2O95670 118 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 KCNA5P22460 613 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 CMPK1P30085 196 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 ALG1LQ6GMV1 187 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 TUBA3EQ6PEY2 450 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 HAGHLQ6PII5 290 aaPredicted RBP11.15□□□□□ -0.62
EWSR1-216ENST00000479135 RBM44Q6ZP01 1051 aaKnown RBP11.15□□□□□ -0.62
EWSR1-216ENST00000479135 WRNIP1Q96S55 665 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 CLN6Q9NWW5 311 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 SOHLH2Q9NX45 425 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 ZNF69Q9UC07 566 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 C13orf42A0A1B0GVH6 325 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 BGNP21810 368 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 SPRP35270 261 aaPredicted RBP11.15□□□□□ -0.62
EWSR1-216ENST00000479135 KCNJ1P48048 391 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 FAM83EQ2M2I3 478 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 PTAR1Q7Z6K3 402 aaPredicted RBP11.15□□□□□ -0.62
EWSR1-216ENST00000479135 ZNF598Q86UK7 904 aaKnown RBP11.15□□□□□ -0.62
EWSR1-216ENST00000479135 OR7G1Q8NGA0 311 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 SCAF8Q9UPN6 1271 aaKnown RBP11.15□□□□□ -0.62
EWSR1-216ENST00000479135 IFT52Q9Y366 437 aa11.15□□□□□ -0.62
EWSR1-216ENST00000479135 POLBP06746 335 aa11.15□□□□□ -0.63
EWSR1-216ENST00000479135 RPS17P08708 135 aaKnown RBP11.15□□□□□ -0.63
EWSR1-216ENST00000479135 PURAQ00577 322 aaKnown RBP11.15□□□□□ -0.63
EWSR1-216ENST00000479135 TCEAL6Q6IPX3 200 aa11.15□□□□□ -0.63
EWSR1-216ENST00000479135 PODNQ7Z5L7 613 aa11.15□□□□□ -0.63
EWSR1-216ENST00000479135 ZHX1-C8orf76Q96EF9 292 aa11.15□□□□□ -0.63
EWSR1-216ENST00000479135 TUBGCP5Q96RT8 1024 aa11.15□□□□□ -0.63
EWSR1-216ENST00000479135 SH2D3AQ9BRG2 576 aa11.15□□□□□ -0.63
EWSR1-216ENST00000479135 HIPK3Q9H422 1215 aa11.15□□□□□ -0.63
EWSR1-216ENST00000479135 IKZF2Q9UKS7 526 aa11.15□□□□□ -0.63
EWSR1-216ENST00000479135 SNX9Q9Y5X1 595 aa11.15□□□□□ -0.63
EWSR1-216ENST00000479135 FAM240BA0A1B0GVZ2 78 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 LCHNA4D1U4 455 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 A8MVJ9 347 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 GTPBP1O00178 669 aaKnown RBP11.14□□□□□ -0.63
EWSR1-216ENST00000479135 SEC22BO75396 215 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 CLN5O75503 358 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 PDX1P52945 283 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 TLE2Q04725 743 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 ORC1Q13415 861 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 ADRM1Q16186 407 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 ABCA11PQ4W5N1 156 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 MPP7Q5T2T1 576 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 PMEPA1Q969W9 287 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 VAT1Q99536 393 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 FRMD8Q9BZ67 464 aaPredicted RBP11.14□□□□□ -0.63
EWSR1-216ENST00000479135 TUBB1Q9H4B7 451 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 I3L521 148 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 PROM1O43490 865 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 PLA2G6O60733 806 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 ZNF12P17014 697 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 RASA2Q15283 850 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 SURF1Q15526 300 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 LINGO2Q7L985 606 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 IFNL3Q8IZI9 196 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 CCDC167Q9P0B6 97 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 ZNF705GA8MUZ8 300 aaPredicted RBP11.14□□□□□ -0.63
EWSR1-216ENST00000479135 TGM6O95932 706 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 FABP6P51161 128 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 C1QBPQ07021 282 aaKnown RBP11.14□□□□□ -0.63
EWSR1-216ENST00000479135 TOP3AQ13472 1001 aaPredicted RBP11.14□□□□□ -0.63
EWSR1-216ENST00000479135 DCST2Q5T1A1 773 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 CROCCP3Q8IVE0 287 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 DHX40Q8IX18 779 aaKnown RBP11.14□□□□□ -0.63
EWSR1-216ENST00000479135 TRPV1Q8NER1 839 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 SUN3Q8TAQ9 357 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 STOML3Q8TAV4 291 aa11.14□□□□□ -0.63
EWSR1-216ENST00000479135 EPS8L3Q8TE67 593 aaKnown RBP11.14□□□□□ -0.63
EWSR1-216ENST00000479135 CATSPERZQ9NTU4 200 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms