RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 PAGE1O75459 146 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 UBTFL6P0CB48 400 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-208ENST00000478423 TSHRP16473 764 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 GRK4P32298 578 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 PRKAA2P54646 552 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 OCA2Q04671 838 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 ARHGAP1Q07960 439 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 CAMK2GQ13555 558 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-208ENST00000478423 BRMS1LQ5PSV4 323 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 CEP19Q96LK0 163 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 FBXO6Q9NRD1 293 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-208ENST00000478423 PAPSS1O43252 624 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-208ENST00000478423 VNN1O95497 513 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 CD48P09326 243 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 CCNG1P51959 295 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 BST1Q10588 318 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 TAF10Q12962 218 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 RNF148Q8N7C7 305 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 ZNF555Q8NEP9 628 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 LRRC15Q8TF66 581 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 ABTB1Q969K4 478 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-208ENST00000478423 BATF3Q9NR55 127 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 MORF4L1Q9UBU8 362 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 DTNAQ9Y4J8 743 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 SNX13Q9Y5W8 968 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 PCDH8O95206 1070 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 CCDC166P0CW27 439 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 PSMA4P25789 261 aaKnown RBP14.43□□□□□ -0.1
NPHP4-208ENST00000478423 SERPINA4P29622 427 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 PEX5P50542 639 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 RAP1GDS1P52306 607 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 PLOD1Q02809 727 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-208ENST00000478423 TBL3Q12788 808 aaKnown RBP14.43□□□□□ -0.1
NPHP4-208ENST00000478423 STARD3Q14849 445 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 TMEM154Q6P9G4 183 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 TRABD2AQ86V40 505 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 TMEM159Q96B96 161 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 TTPALQ9BTX7 342 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 SLC7A5P2Q9GIP4 190 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 HIPK3Q9H422 1215 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 DPEP3Q9H4B8 488 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 LNPEPQ9UIQ6 1025 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 FBXO5Q9UKT4 447 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 ANKRD6Q9Y2G4 727 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 PCDHA11Q9Y5I1 949 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 KRT6AP02538 564 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 KRT6BP04259 564 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 UNGP13051 313 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-208ENST00000478423 EPB42P16452 691 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 KRT6CP48668 564 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 PRIM2P49643 509 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 TARBP2Q15633 366 aaKnown RBP14.43□□□□□ -0.1
NPHP4-208ENST00000478423 SNX27Q96L92 541 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 DACH2Q96NX9 599 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 MYLK2Q9H1R3 596 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 NEUROG2Q9H2A3 272 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 CATSPERZQ9NTU4 200 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 A0A1W2PPM1 405 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 MYBPHLA2RUH7 354 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 RAD51BO15315 384 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 SYNCRIPO60506 623 aaKnown RBP14.42□□□□□ -0.1
NPHP4-208ENST00000478423 ITGA2BP08514 1039 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 SKIV2L2P42285 1042 aaKnown RBP14.42□□□□□ -0.1
NPHP4-208ENST00000478423 WNT3AP56704 352 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 CTBP1Q13363 440 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 PDK4Q16654 411 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 TRMT5Q32P41 509 aaKnown RBP14.42□□□□□ -0.1
NPHP4-208ENST00000478423 KLHL5Q96PQ7 755 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 MINDY3Q9H8M7 445 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 PARVBQ9HBI1 364 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 DLGAP2Q9P1A6 1054 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 VTI1BQ9UEU0 232 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 MSH3P20585 1137 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 VSTM1Q6UX27 236 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 FBXL18Q96ME1 805 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 PPP1R10Q96QC0 940 aaKnown RBP14.42□□□□□ -0.1
NPHP4-208ENST00000478423 CORO1BQ9BR76 489 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 MLPHQ9BV36 600 aaPredicted RBP14.42□□□□□ -0.1
NPHP4-208ENST00000478423 GNG14A0A1W2PPG7 69 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 PMM2O15305 246 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 LMO2P25791 158 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 PTP4A2Q12974 167 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 OR9Q1Q8NGQ5 310 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 OTULINQ96BN8 352 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 VPS50Q96JG6 964 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 TEPSINQ96N21 525 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 POMKQ9H5K3 350 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 ALG9Q9H6U8 611 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 CCDC167Q9P0B6 97 aa14.42□□□□□ -0.1
NPHP4-208ENST00000478423 KDM1AO60341 852 aa14.41□□□□□ -0.1
NPHP4-208ENST00000478423 SLC2A4P14672 509 aa14.41□□□□□ -0.1
NPHP4-208ENST00000478423 HADHBP55084 474 aaKnown RBP14.41□□□□□ -0.1
NPHP4-208ENST00000478423 ENPEPQ07075 957 aa14.41□□□□□ -0.1
NPHP4-208ENST00000478423 DMC1Q14565 340 aa14.41□□□□□ -0.1
NPHP4-208ENST00000478423 CCL14Q16627 93 aa14.41□□□□□ -0.1
NPHP4-208ENST00000478423 CCDC149Q6ZUS6 474 aa14.41□□□□□ -0.1
NPHP4-208ENST00000478423 CPNE8Q86YQ8 564 aa14.41□□□□□ -0.1
NPHP4-208ENST00000478423 TRIM48Q8IWZ4 208 aa14.41□□□□□ -0.1
NPHP4-208ENST00000478423 SYTL1Q8IYJ3 562 aa14.41□□□□□ -0.1
NPHP4-208ENST00000478423 FAM9CQ8IZT9 166 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms