RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 TMEM248Q9NWD8 314 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 DNAI1Q9UI46 699 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 HS3ST2Q9Y278 367 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 PLXND1Q9Y4D7 1925 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 K7ERQ8 282 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 CBX4O00257 560 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 RNASEH1O60930 286 aaKnown RBP15.96■□□□□ 0.15
HMGA1-206ENST00000478214 LRCH4O75427 683 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 ZMPSTE24O75844 475 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 RNF8O76064 485 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 ITPKAP23677 461 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 EPHB2P29323 1055 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 MIPP30301 263 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 OXTRP30559 389 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 ACVRL1P37023 503 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 MAPKAPK2P49137 400 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 ZNF33AQ06730 810 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 MAPK8IP2Q13387 824 aaPredicted RBP15.96■□□□□ 0.15
HMGA1-206ENST00000478214 CST6Q15828 149 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 SLC18A3Q16572 532 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 CA9Q16790 459 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 DAB2IPQ5VWQ8 1189 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 Q6ZVU0 165 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 ATP11CQ8NB49 1132 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 BTBD6Q96KE9 485 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 HSPA12BQ96MM6 686 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 SNRNP25Q9BV90 132 aaKnown RBP15.96■□□□□ 0.15
HMGA1-206ENST00000478214 NUP85Q9BW27 656 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 PABPC3Q9H361 631 aaKnown RBP15.96■□□□□ 0.15
HMGA1-206ENST00000478214 RETREG1Q9H6L5 497 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 ATP13A1Q9HD20 1204 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 VPS45Q9NRW7 570 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 TMEM74BQ9NUR3 256 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 AP4E1Q9UPM8 1137 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 SPTBN4Q9H254 2564 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 THADAQ6YHU6 1953 aa15.96■□□□□ 0.15
HMGA1-206ENST00000478214 ATXN2Q99700 1313 aaKnown RBP15.95■□□□□ 0.14
HMGA1-206ENST00000478214 SSU72P8A0A1W2PR75 194 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 PATE3B3GLJ2 98 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 AKR1B15C9JRZ8 316 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-206ENST00000478214 MID1O15344 667 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 SMAD6O43541 496 aaKnown RBP15.95■□□□□ 0.14
HMGA1-206ENST00000478214 PRPSAP2O60256 369 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 ACSL1P33121 698 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 PSMD8P48556 350 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 LMNB2Q03252 620 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 ELAVL3Q14576 367 aaKnown RBP15.95■□□□□ 0.14
HMGA1-206ENST00000478214 TTC31Q49AM3 519 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-206ENST00000478214 ERMARDQ5T6L9 678 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 IL31Q6EBC2 164 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 CYP4V2Q6ZWL3 525 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-206ENST00000478214 SYT12Q8IV01 421 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 CNGA4Q8IV77 575 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 C12orf50Q8NA57 414 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-206ENST00000478214 ARHGEF2Q92974 986 aaKnown RBP15.95■□□□□ 0.14
HMGA1-206ENST00000478214 ZNF419Q96HQ0 510 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-206ENST00000478214 PACSIN1Q9BY11 444 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 ACE2Q9BYF1 805 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-206ENST00000478214 DEF6Q9H4E7 631 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 DHX35Q9H5Z1 703 aaKnown RBP15.95■□□□□ 0.14
HMGA1-206ENST00000478214 SERGEFQ9UGK8 458 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 ANAPC7Q9UJX3 599 aa15.95■□□□□ 0.14
HMGA1-206ENST00000478214 AKR1B10O60218 316 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 BNIP3LO60238 219 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 GDF9O60383 454 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 RAMP2O60895 175 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 IL1BP01584 269 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 TCF4P15884 667 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 SLC8A1P32418 973 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 ZNF75DP51815 510 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 TPI1P60174 286 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 ARF5P84085 180 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 RTL3Q8N8U3 475 aaKnown RBP15.94■□□□□ 0.14
HMGA1-206ENST00000478214 GANCQ8TET4 914 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 OR8D1Q8WZ84 308 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 FOXJ1Q92949 421 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 KCTD15Q96SI1 283 aaPredicted RBP15.94■□□□□ 0.14
HMGA1-206ENST00000478214 MAGEH1Q9H213 219 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 NOL6Q9H6R4 1146 aaKnown RBP15.94■□□□□ 0.14
HMGA1-206ENST00000478214 NHEJ1Q9H9Q4 299 aaPredicted RBP15.94■□□□□ 0.14
HMGA1-206ENST00000478214 RXFP3Q9NSD7 469 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 FBXL12Q9NXK8 326 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 PILRBQ9UKJ0 227 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 ACTL7AQ9Y615 435 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 DOCK4Q8N1I0 1966 aa15.94■□□□□ 0.14
HMGA1-206ENST00000478214 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.93■□□□□ 0.14
HMGA1-206ENST00000478214 A0A1W2PP55 124 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 FOXD2O60548 495 aaPredicted RBP15.93■□□□□ 0.14
HMGA1-206ENST00000478214 RNASEH2AO75792 299 aaKnown RBP15.93■□□□□ 0.14
HMGA1-206ENST00000478214 IL1R2P27930 398 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 PCK1P35558 622 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 ETFBP38117 255 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 CLCN6P51797 869 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 METAP1P53582 386 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 PIGHQ14442 188 aaPredicted RBP15.93■□□□□ 0.14
HMGA1-206ENST00000478214 ACAP1Q15027 740 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 POLD3Q15054 466 aaPredicted RBP15.93■□□□□ 0.14
HMGA1-206ENST00000478214 AASDHQ4L235 1098 aaPredicted RBP15.93■□□□□ 0.14
HMGA1-206ENST00000478214 RETSATQ6NUM9 610 aa15.93■□□□□ 0.14
HMGA1-206ENST00000478214 RGL4Q8IZJ4 473 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms