RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SFMBT1Q9UHJ3 866 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 PADI4Q9UM07 663 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 HS3ST3A1Q9Y663 406 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 C2orf72A6NCS6 295 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 POM121BA6NF01 834 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 WIPF3A6NGB9 483 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 D6RAR5 112 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 GCATO75600 419 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 C4BPAP04003 597 aaKnown RBP7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 PRKCGP05129 697 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 IDEP14735 1019 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 JUNDP17535 347 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 GNLYP22749 145 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 AKT2P31751 481 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 ETV5P41161 510 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 ASPAP45381 313 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 RPIAP49247 311 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 CASP4P49662 377 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 RPS24P62847 133 aaKnown RBP7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 ZFP36L1Q07352 338 aaKnown RBP7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 INCA1Q0VD86 236 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 KLRB1Q12918 225 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 SGSM1Q2NKQ1 1148 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 KMT5BQ4FZB7 885 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 PIP5KL1Q5T9C9 394 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 FAM46CQ5VWP2 391 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 C1QL3Q5VWW1 255 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 OR6B2Q6IFH4 312 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 SV2BQ7L1I2 683 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 PARGQ86W56 976 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 HORMAD1Q86X24 394 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 PLEKHO2Q8TD55 490 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 LMX1AQ8TE12 382 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 NDRG1Q92597 394 aaKnown RBP7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 USP7Q93009 1102 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 NKD1Q969G9 470 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 MYEOVQ96EZ4 313 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 ABHD17AQ96GS6 310 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 EPSTI1Q96J88 318 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 PPP1R13BQ96KQ4 1090 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 PRICKLE1Q96MT3 831 aaPredicted RBP7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 EPAS1Q99814 870 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 B3GNT4Q9C0J1 378 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 PLSCR2Q9NRY7 297 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 AGPAT3Q9NRZ7 376 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 PANK4Q9NVE7 773 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 STIM2Q9P246 746 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 STK17AQ9UEE5 414 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 RABGEF1Q9UJ41 708 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 LIMCH1Q9UPQ0 1083 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 LOXL2Q9Y4K0 774 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 NF1P21359 2839 aa7.55□□□□□ -1.2
SPTLC1-205ENST00000477888 A6NNZ2 444 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 LMO7DNF2Z398 122 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 H3BM21 787 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 MCF2LO15068 1137 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 SPINT1O43278 529 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 MSI1O43347 362 aaKnown RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 VPS4BO75351 444 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 KIF20AO95235 890 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 CLDN1O95832 211 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 ZBED1O96006 694 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 IGLV3-27P01718 113 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 RPN1P04843 607 aaKnown RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 P4HA1P13674 534 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 ITGB7P26010 798 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 CD82P27701 267 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 GRNP28799 593 aaKnown RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 STK19P49842 368 aaPredicted RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 AP3M2P53677 418 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 ADKP55263 362 aaKnown RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 CCL7P80098 99 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 EIF2B5Q13144 721 aaKnown RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 BIRC3Q13489 604 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 TMEM259Q4ZIN3 620 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 TPRG1LQ5T0D9 272 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 PPP1R26Q5T8A7 1209 aaPredicted RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 NADSYN1Q6IA69 706 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 MAMDC2Q7Z304 686 aaPredicted RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 PIGZQ86VD9 579 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 APCDD1Q8J025 514 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 CARNMT1Q8N4J0 409 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 XXYLT1Q8NBI6 393 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 HJURPQ8NCD3 748 aaPredicted RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 GALNT11Q8NCW6 608 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 ZNF507Q8TCN5 953 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 JPH3Q8WXH2 748 aaPredicted RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 AZIN2Q96A70 460 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 TMEM159Q96B96 161 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 MS4A3Q96HJ5 214 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 TMEM74Q96NL1 305 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 CATSPER2Q96P56 530 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 GFM1Q96RP9 751 aaKnown RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 NT5C1AQ9BXI3 368 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 SRRTQ9BXP5 876 aaKnown RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 OLA1Q9NTK5 396 aaKnown RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 VPS4AQ9UN37 437 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 ZFR2Q9UPR6 939 aaKnown RBP7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 KIF26BQ2KJY2 2108 aa7.54□□□□□ -1.2
SPTLC1-205ENST00000477888 ADGRG4Q8IZF6 3080 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms