RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 GJB3O75712 270 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 SRCP12931 536 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 MAPK8P45983 427 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 NUMBP49757 651 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 ZNF143P52747 638 aaPredicted RBP22.3■■□□□ 1.16
COL9A3-211ENST00000477612 ATXN3P54252 364 aaPredicted RBP22.3■■□□□ 1.16
COL9A3-211ENST00000477612 GALCP54803 685 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 SCAPQ12770 1279 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 SEMA3BQ13214 749 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 ZCCHC9Q8N567 271 aaKnown RBP22.3■■□□□ 1.16
COL9A3-211ENST00000477612 MINDY1Q8N5J2 469 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 AADATQ8N5Z0 425 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 BIRC7Q96CA5 298 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 ORAI3Q9BRQ5 295 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 VPS51Q9UID3 782 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 KNL1Q8NG31 2342 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 TMEM131Q92545 1883 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 DOCK9Q9BZ29 2069 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 MT-CO1P00395 513 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 SERPINC1P01008 464 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 GZMAP12544 262 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 CEACAM1P13688 526 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 GOT1P17174 413 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 CLCN6P51797 869 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 UAP1L1Q3KQV9 507 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 TFAP2DQ7Z6R9 452 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 OR8D1Q8WZ84 308 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 OMDQ99983 421 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 HAUS4Q9H6D7 363 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 TAS2R14Q9NYV8 317 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 PPM1HQ9ULR3 514 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 NEU3Q9UQ49 428 aa22.29■■□□□ 1.16
COL9A3-211ENST00000477612 SNAP91O60641 907 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 OPHN1O60890 802 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 ZMPSTE24O75844 475 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 IGHV4-34P06331 123 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 RRM1P23921 792 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 CD27P26842 260 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 DRD3P35462 400 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 PBX1P40424 430 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 RPL7AP62424 266 aaKnown RBP22.28■■□□□ 1.16
COL9A3-211ENST00000477612 FANCCQ00597 558 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 SLC20A2Q08357 652 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 GRIK2Q13002 908 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 SLC14A1Q13336 389 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 ACCSLQ4AC99 568 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 N4BP2L1Q5TBK1 243 aaPredicted RBP22.28■■□□□ 1.16
COL9A3-211ENST00000477612 SFMBT2Q5VUG0 894 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 E4F1Q66K89 784 aaPredicted RBP22.28■■□□□ 1.16
COL9A3-211ENST00000477612 KIAA0895LQ68EN5 471 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 DNAJC24Q6P3W2 148 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 LRSAM1Q6UWE0 723 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 DSG4Q86SJ6 1040 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 PIP4P1Q86T03 277 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 LUZP1Q86V48 1076 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 NLRP14Q86W24 1093 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 CCDC185Q8N715 623 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 OR2T34Q8NGX1 318 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 GTPBP2Q9BX10 602 aaKnown RBP22.28■■□□□ 1.16
COL9A3-211ENST00000477612 MIR1-1HGQ9H1L0 117 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 SARDHQ9UL12 918 aa22.28■■□□□ 1.16
COL9A3-211ENST00000477612 FAM72CH0Y354 149 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 CCP110O43303 1012 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 RNASEH2AO75792 299 aaKnown RBP22.27■■□□□ 1.16
COL9A3-211ENST00000477612 IL1BP01584 269 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 RHOQP17081 205 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 PSMD8P48556 350 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 MAPKAPK2P49137 400 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 AIF1P55008 147 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 TPM4P67936 248 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 ASIC2Q16515 512 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 FAM72AQ5TYM5 149 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 FAM46CQ5VWP2 391 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 PLEKHA7Q6IQ23 1121 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 FAM72DQ6L9T8 149 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 Q6ZVU0 165 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 ZNF571Q7Z3V5 609 aaPredicted RBP22.27■■□□□ 1.16
COL9A3-211ENST00000477612 FAM72BQ86X60 149 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 HDDC3Q8N4P3 179 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 OR7D4Q8NG98 312 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 GANCQ8TET4 914 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 MCEEQ96PE7 176 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 CNPY3Q9BT09 278 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 ACE2Q9BYF1 805 aaPredicted RBP22.27■■□□□ 1.16
COL9A3-211ENST00000477612 MAGEB5Q9BZ81 275 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 KDM4CQ9H3R0 1056 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 TMEM248Q9NWD8 314 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 TPX2Q9ULW0 747 aaKnown RBP22.27■■□□□ 1.16
COL9A3-211ENST00000477612 SLCO1B1Q9Y6L6 691 aa22.27■■□□□ 1.16
COL9A3-211ENST00000477612 LRRC72A6NJI9 287 aa22.26■■□□□ 1.15
COL9A3-211ENST00000477612 SLC7A4O43246 635 aa22.26■■□□□ 1.15
COL9A3-211ENST00000477612 LRIG2O94898 1065 aa22.26■■□□□ 1.15
COL9A3-211ENST00000477612 PLEKP08567 350 aaPredicted RBP22.26■■□□□ 1.15
COL9A3-211ENST00000477612 L1CAMP32004 1257 aa22.26■■□□□ 1.15
COL9A3-211ENST00000477612 NOVA1P51513 510 aaKnown RBP22.26■■□□□ 1.15
COL9A3-211ENST00000477612 AFF3P51826 1226 aaKnown RBP22.26■■□□□ 1.15
COL9A3-211ENST00000477612 BNC1Q01954 994 aa22.26■■□□□ 1.15
COL9A3-211ENST00000477612 GNA12Q03113 381 aa22.26■■□□□ 1.15
COL9A3-211ENST00000477612 SKOR2Q2VWA4 1001 aaPredicted RBP22.26■■□□□ 1.15
COL9A3-211ENST00000477612 PSAPL1Q6NUJ1 521 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms