RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PRR11Q96HE9 360 aaPredicted RBP12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 NMUR2Q9GZQ4 415 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 MUC3BQ9H195 1237 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 SLA2Q9H6Q3 261 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 A0A1W2PPW3 197 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 ARHGAP42A6NI28 874 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 H3BUI4 141 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 CYP26A1O43174 497 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 TYROBPO43914 113 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 NOL3O60936 208 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 DGAT1O75907 488 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 NOL4O94818 638 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 CETPP11597 493 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 CDH1P12830 882 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 ACAT1P24752 427 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 MAN1A1P33908 653 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 CPOXP36551 454 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 CNTN2Q02246 1040 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 PLA2G4FQ68DD2 849 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 UGT3A1Q6NUS8 523 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 ZFP1Q6P2D0 407 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 PLEKHG7Q6ZR37 379 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 TTC7BQ86TV6 843 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 C12orf56Q8IXR9 622 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 PMM1Q92871 262 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 C18orf8Q96DM3 657 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 TSSK1BQ9BXA7 367 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 MTMR12Q9C0I1 747 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 SCUBE2Q9NQ36 999 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 KCNK4Q9NYG8 393 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 TXNDC16Q9P2K2 825 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 WDR81Q562E7 1941 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 FAM25AB3EWG3 89 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 FAM25CB3EWG5 89 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 FAM25GB3EWG6 89 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 SUPT20HL2P0C7V6 817 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 GABRB3P28472 473 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 SERPINB1P30740 379 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 RPA3P35244 121 aaPredicted RBP12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 TMPRSS15P98073 1019 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 CTBSQ01459 385 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 GRSF1Q12849 480 aaKnown RBP eCLIP12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 GK3PQ14409 553 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 TMED2Q15363 201 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 XKR3Q5GH77 459 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 AARS2Q5JTZ9 985 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 CCDC137Q6PK04 289 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 UNC5AQ6ZN44 842 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 MOB2Q70IA6 237 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 TRMT1LQ7Z2T5 733 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 KRT77Q7Z794 578 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 KSR1Q8IVT5 923 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 DTX3Q8N9I9 347 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 FBXO27Q8NI29 283 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 GTF3C2Q8WUA4 911 aaPredicted RBP12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 SLCO2A1Q92959 643 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 ACDQ96AP0 544 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 INTS12Q96CB8 462 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 TARS2Q9BW92 718 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 TAS2R7Q9NYW3 318 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 NAGPAQ9UK23 515 aa12.9□□□□□ -0.34
RTFDC1-207ENST00000477573 LCTP09848 1927 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 MYH9P35579 1960 aaKnown RBP12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 TRIM64A6NGJ6 449 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 H0YCG3 227 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 SNPHO15079 494 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 TM9SF1O15321 606 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 MAN1A2O60476 641 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 EPN2O95208 641 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 FGFR1P11362 822 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 KRT10P13645 584 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 EDNRBP24530 442 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 OR3A3P47888 321 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 ERFP50548 548 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 COPZ1P61923 177 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 SP4Q02446 784 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 RUNX1T1Q06455 604 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 TARDBPQ13148 414 aaKnown RBP eCLIP12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 ADGRE1Q14246 886 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 CDK10Q15131 360 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 SLC1A5Q15758 541 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 FGD3Q5JSP0 725 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 DCAF12L1Q5VU92 463 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 GALNT18Q6P9A2 607 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 TCAIMQ8N3R3 496 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 ARL6IP6Q8N6S5 226 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 C7orf57Q8NEG2 295 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 S100ZQ8WXG8 99 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 SLC10A4Q96EP9 437 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 GANQ9H2C0 597 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 MANSC1Q9H8J5 431 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 CXorf21Q9HAI6 301 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 MAGEE1Q9HCI5 957 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 UCKL1Q9NWZ5 548 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 NINJ2Q9NZG7 142 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 GCNT4Q9P109 453 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 DNMT3BQ9UBC3 853 aaKnown RBP12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 SEPT9Q9UHD8 586 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 CDC14AQ9UNH5 594 aa12.89□□□□□ -0.35
RTFDC1-207ENST00000477573 WBP11Q9Y2W2 641 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms