RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 GLRX5Q86SX6 157 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 PIGZQ86VD9 579 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 PPP1R9BQ96SB3 815 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 ACOX2Q99424 681 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 BTBD1Q9H0C5 482 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 SGK2Q9HBY8 427 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 METTL14Q9HCE5 456 aaKnown RBP7.55□□□□□ -1.2
BRCA1-214ENST00000477152 OSGEPQ9NPF4 335 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 CNGB3Q9NQW8 809 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 OSER1Q9NX31 292 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 CORINQ9Y5Q5 1042 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 PCDH15Q96QU1 1955 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 MDM4O15151 490 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 TRIM24O15164 1050 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 SART1O43290 800 aaKnown RBP7.55□□□□□ -1.2
BRCA1-214ENST00000477152 SH3BP5O60239 455 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 ASLP04424 464 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 FTH1P19P0C7X4 201 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 TRIM49P0CI25 452 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 TRIM49CP0CI26 452 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 CD19P15391 556 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 SPINK2P20155 84 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 CD68P34810 354 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-214ENST00000477152 IL12RB1P42701 662 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 FKBP3Q00688 224 aaKnown RBP7.55□□□□□ -1.2
BRCA1-214ENST00000477152 RAB41Q5JT25 222 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 MPP7Q5T2T1 576 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 ADGRF1Q5T601 910 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 PM20D1Q6GTS8 502 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 LRFN4Q6PJG9 635 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 KRBA2Q6ZNG9 492 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 SCD5Q86SK9 330 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 FMNL3Q8IVF7 1028 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 SCML4Q8N228 414 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 CHCHD4Q8N4Q1 142 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 ZCCHC9Q8N567 271 aaKnown RBP7.55□□□□□ -1.2
BRCA1-214ENST00000477152 FAM169BQ8N8A8 192 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 IRGQQ8WZA9 623 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 SNX19Q92543 992 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 WBP2Q969T9 261 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 PLPPR2Q96GM1 343 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 GAREM1Q9H706 876 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 TM7SF3Q9NS93 570 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 NUDT5Q9UKK9 219 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 HPSEQ9Y251 543 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 EIF4E1BA6NMX2 242 aaKnown RBP7.54□□□□□ -1.2
BRCA1-214ENST00000477152 E9PAM4 449 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 YKT6O15498 198 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 FBXO21O94952 628 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 NNMTP40261 264 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 RAD23BP54727 409 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 C21orf59P57076 290 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 NUCB2P80303 420 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 PPP3CAQ08209 521 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 MTA1Q13330 715 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 MPP2Q14168 576 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 GEN1Q17RS7 908 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 GOLGA7BQ2TAP0 167 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 DCAF17Q5H9S7 520 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-214ENST00000477152 ZNF776Q68DI1 518 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-214ENST00000477152 TREML4Q6UXN2 200 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 CHST9Q7L1S5 443 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 FAM217AQ8IXS0 508 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 SLC4A11Q8NBS3 891 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 GANCQ8TET4 914 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 KCTD13Q8WZ19 329 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 AZIN2Q96A70 460 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 PIWIL1Q96J94 861 aaKnown RBP7.54□□□□□ -1.2
BRCA1-214ENST00000477152 TWNKQ96RR1 684 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 APOBEC3GQ9HC16 384 aaKnown RBP7.54□□□□□ -1.2
BRCA1-214ENST00000477152 CD248Q9HCU0 757 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 KLK13Q9UKR3 277 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 CKAP5Q14008 2032 aa7.54□□□□□ -1.2
BRCA1-214ENST00000477152 FAM237AA0A1B0GTK4 181 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 ANTXRLA6NF34 631 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 LRRC72A6NJI9 287 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 WASH3PC4AMC7 463 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 STK10O94804 968 aaKnown RBP7.53□□□□□ -1.2
BRCA1-214ENST00000477152 ZNF202O95125 648 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 BPNT1O95861 308 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 KLKB1P03952 638 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 PAEPP09466 180 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 DLDP09622 509 aaKnown RBP7.53□□□□□ -1.2
BRCA1-214ENST00000477152 PABPC1P11940 636 aaKnown RBP7.53□□□□□ -1.2
BRCA1-214ENST00000477152 GRK6P43250 576 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 CCT8P50990 548 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 OXCT1P55809 520 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 LRRC63Q05C16 580 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 CUL2Q13617 745 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 HLA-BQ31612 363 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 WIPI1Q5MNZ9 446 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-214ENST00000477152 C1orf220Q5T0J3 134 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 RNF219Q5W0B1 726 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-214ENST00000477152 LINC00114Q6XXX2 140 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 USP30Q70CQ3 517 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 KDM1BQ8NB78 822 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 CPLX3Q8WVH0 158 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 GSDMAQ96QA5 445 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 ULBP1Q9BZM6 244 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 ARMCX3Q9UH62 379 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms