RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 PROCP04070 461 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 DNAJB2P25686 324 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 ADRA1AP35348 466 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 TMPRSS15P98073 1019 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 CDH17Q12864 832 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 PCLAFQ15004 111 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 SMAD1Q15797 465 aaKnown RBP11.72□□□□□ -0.53
NUP188-205ENST00000477069 NFE2Q16621 373 aaPredicted RBP11.72□□□□□ -0.53
NUP188-205ENST00000477069 DDR2Q16832 855 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 SDHAF4Q5VUM1 108 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 DENND5AQ6IQ26 1287 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 C16orf46Q6P387 395 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.72□□□□□ -0.53
NUP188-205ENST00000477069 PTCD3Q96EY7 689 aaKnown RBP11.72□□□□□ -0.53
NUP188-205ENST00000477069 PRR11Q96HE9 360 aaPredicted RBP11.72□□□□□ -0.53
NUP188-205ENST00000477069 APOL2Q9BQE5 337 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 NOL6Q9H6R4 1146 aaKnown RBP11.72□□□□□ -0.53
NUP188-205ENST00000477069 ELAC1Q9H777 363 aaKnown RBP11.72□□□□□ -0.53
NUP188-205ENST00000477069 CD248Q9HCU0 757 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 PRDM5Q9NQX1 630 aaPredicted RBP11.72□□□□□ -0.53
NUP188-205ENST00000477069 KCNK4Q9NYG8 393 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 UBP1Q9NZI7 540 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 FNIP2Q9P278 1114 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 PRG3Q9Y2Y8 225 aaPredicted RBP11.72□□□□□ -0.53
NUP188-205ENST00000477069 KIF3CO14782 793 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 PEX11BO96011 259 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 NEFHP12036 1026 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 SERPINB3P29508 390 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 GRK4P32298 578 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 MLLT6P55198 1093 aaPredicted RBP11.72□□□□□ -0.53
NUP188-205ENST00000477069 PRPSAP1Q14558 356 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 PPM1JQ5JR12 505 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 LRRC8DQ7L1W4 858 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 CLEC14AQ86T13 490 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 LINC00523Q86TU6 105 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 CCDC117Q8IWD4 279 aaPredicted RBP11.72□□□□□ -0.53
NUP188-205ENST00000477069 REM2Q8IYK8 340 aaPredicted RBP11.72□□□□□ -0.53
NUP188-205ENST00000477069 DCLK2Q8N568 766 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 SPATA22Q8NHS9 363 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 USP33Q8TEY7 942 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 TLE6Q9H808 572 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 GLOD4Q9HC38 313 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 SNX15Q9NRS6 342 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 MARCH5Q9NX47 278 aa11.72□□□□□ -0.53
NUP188-205ENST00000477069 AAR2Q9Y312 384 aaKnown RBP11.72□□□□□ -0.53
NUP188-205ENST00000477069 C2orf71A6NGG8 1288 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 A8MUI8 341 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 ARVCFO00192 962 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 CHUKO15111 745 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 NBNO60934 754 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 MYL2P10916 166 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 NMBRP28336 390 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 HOXD10P28358 340 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 TUBP50607 506 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 FASTKD1Q53R41 847 aaKnown RBP11.71□□□□□ -0.53
NUP188-205ENST00000477069 FSTL4Q6MZW2 842 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 STRA8Q7Z7C7 330 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 TTC9BQ8N6N2 239 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 OR6Y1Q8NGX8 325 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 CASD1Q96PB1 797 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 FBXO44Q9H4M3 255 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 STARD7Q9NQZ5 370 aa11.71□□□□□ -0.53
NUP188-205ENST00000477069 FBXO6Q9NRD1 293 aaPredicted RBP11.71□□□□□ -0.53
NUP188-205ENST00000477069 HBS1LQ9Y450 684 aaKnown RBP11.71□□□□□ -0.53
NUP188-205ENST00000477069 ATP9BO43861 1147 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 VNN2O95498 520 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 INHAP05111 366 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 HLA-DQB2P05538 268 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 TPH1P17752 444 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 FGFR3P22607 806 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 SERPINB8P50452 374 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 CSE1LP55060 971 aaKnown RBP11.71□□□□□ -0.54
NUP188-205ENST00000477069 ATG14Q6ZNE5 492 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 KCNMB4Q86W47 210 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 CRIPAKQ8N1N5 446 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 FATE1Q969F0 183 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 AZIN2Q96A70 460 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 ZNF778Q96MU6 729 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 TBL1YQ9BQ87 522 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 TMEM216Q9P0N5 145 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 GMIPQ9P107 970 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 PHF24Q9UPV7 400 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 PCDHB5Q9Y5E4 795 aa11.71□□□□□ -0.54
NUP188-205ENST00000477069 TBC1D4O60343 1298 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 MT-CYBP00156 380 aaPredicted RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 F7P08709 466 aaPredicted RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 SPRP35270 261 aaPredicted RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 GMPRP36959 345 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 PDE1BQ01064 536 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 KRT72Q14CN4 511 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 HSP90AA5PQ58FG0 334 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 TIGD7Q6NT04 549 aaPredicted RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 ZCCHC23Q6ZST2 131 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 CMC1Q7Z7K0 106 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 ARHGAP18Q8N392 663 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 GPR62Q9BZJ7 368 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 ARL8BQ9NVJ2 186 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 THAP1Q9NVV9 213 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 MPP6Q9NZW5 540 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 PPARGC1AQ9UBK2 798 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms