RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 MSRB1Q9NZV6 116 aa4.96□□□□□ -1.62
SOX2-OT-207ENST00000476964 RAB21Q9UL25 225 aa4.96□□□□□ -1.62
SOX2-OT-207ENST00000476964 TRPC5Q9UL62 973 aaPredicted RBP4.96□□□□□ -1.62
SOX2-OT-207ENST00000476964 PCDHA12Q9UN75 941 aa4.96□□□□□ -1.62
SOX2-OT-207ENST00000476964 DERAQ9Y315 318 aa4.96□□□□□ -1.62
SOX2-OT-207ENST00000476964 CCDC196A0A1B0GTZ2 297 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 A6NCN8 305 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 MBD3L5A6NJ08 208 aaPredicted RBP4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 TCERG1O14776 1098 aaKnown RBP4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 ZNF500O60304 480 aaPredicted RBP4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 UGDHO60701 494 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 BMP15O95972 392 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 ALDOAP04075 364 aaKnown RBP4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 HNRNPA1P09651 372 aaKnown RBP eCLIP4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 ALDOCP09972 364 aaKnown RBP4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 PEPDP12955 493 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 TNFRSF1BP20333 461 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 GRK5P34947 590 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 ADPRHP54922 357 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 CASP6P55212 293 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 VAMP2P63027 116 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 SF3A3Q12874 501 aaKnown RBP eCLIP4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 PDCLQ13371 301 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 TBRG1Q3YBR2 411 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 SLC45A4Q5BKX6 768 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 PIK3CD-AS1Q5SR53 167 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 MAP3K21Q5TCX8 1036 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 SYNE3Q6ZMZ3 975 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 RTL10Q7L3V2 364 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 ADGRF4Q8IZF3 695 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 ST8SIA4Q92187 359 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 HTATIP2Q9BUP3 242 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 TWSG1Q9GZX9 223 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 PAIP1Q9H074 479 aaKnown RBP4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 FOXP1Q9H334 677 aaPredicted RBP4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 ZBTB40Q9NUA8 1239 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 NDUFAF4Q9P032 175 aa4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 COPG1Q9Y678 874 aaKnown RBP4.95□□□□□ -1.62
SOX2-OT-207ENST00000476964 TBC1D3DA0A087WVF3 549 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 TBC1D3IA0A087WXS9 549 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 TBC1D3EA0A087X179 549 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 TBC1D3KA0A087X1G2 549 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 A0A1W2PPH5 198 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 TBC1D3BA6NDS4 549 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 TBC1D3FA6NER0 549 aaPredicted RBP4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 TBC1D3LB9A6J9 549 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 STX16-NPEPL1H3BU86 382 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 STX16O14662 325 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 GFPT2O94808 682 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 TBC1D3HP0C7X1 549 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 CPA1P15085 419 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 KRT32Q14532 448 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 ANKRD1Q15327 319 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 GALNTL6Q49A17 601 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 EPHA10Q5JZY3 1008 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 TTC22Q5TAA0 569 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 SLC9C2Q5TAH2 1124 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 ASPHD1Q5U4P2 390 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 ATG16L1Q676U5 607 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 HAUS3Q68CZ6 603 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 TBC1D3GQ6DHY5 549 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 ISM2Q6H9L7 571 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 TBC1D3CQ6IPX1 549 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 ZNF793Q6ZN11 406 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 MDGA2Q7Z553 956 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 ANKS1BQ7Z6G8 1248 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 TBC1D3Q8IZP1 549 aaPredicted RBP4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 ZNF366Q8N895 744 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 CLEC4CQ8WTT0 213 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 STAMQ92783 540 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 CLMNQ96JQ2 1002 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 CHCHD6Q9BRQ6 235 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 WDR83Q9BRX9 315 aaKnown RBP4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 ABHD16BQ9H3Z7 469 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 G6PC2Q9NQR9 355 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 THSD1Q9NS62 852 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 POT1Q9NUX5 634 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 IPO11Q9UI26 975 aaKnown RBP4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 SLC45A1Q9Y2W3 748 aa4.94□□□□□ -1.62
SOX2-OT-207ENST00000476964 A0A1W2PPC1 479 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 KCNJ18B7U540 433 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 KCNAB3O43448 404 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 TULP3O75386 442 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 RTN3O95197 1032 aaPredicted RBP4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 EPN2O95208 641 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 FOXG1P55316 489 aaPredicted RBP4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 RNASELQ05823 741 aaKnown RBP4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 DCTN1Q14203 1278 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 SEMA3AQ14563 771 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 SMAD1Q15797 465 aaKnown RBP4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 ACAD10Q6JQN1 1059 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 BBS12Q6ZW61 710 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 TECPR1Q7Z6L1 1165 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 TSPYL6Q8N831 410 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 SLC2A12Q8TD20 617 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 CENPIQ92674 756 aaPredicted RBP4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 REEP2Q9BRK0 252 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 SPAG4Q9NPE6 437 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 CLIC5Q9NZA1 410 aa4.93□□□□□ -1.62
SOX2-OT-207ENST00000476964 ORC3Q9UBD5 711 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms