RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 ZBTB9Q96C00 473 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 MAGEH1Q9H213 219 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 SEMA4AQ9H3S1 761 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 E7EVH7 732 aa29.46■■■□□ 2.31
VEGFA-211ENST00000476772 PEX11BO96011 259 aa29.46■■■□□ 2.31
VEGFA-211ENST00000476772 NUMBP49757 651 aa29.46■■■□□ 2.31
VEGFA-211ENST00000476772 CXorf57Q6NSI4 855 aaKnown RBP29.46■■■□□ 2.31
VEGFA-211ENST00000476772 SETD3Q86TU7 594 aaPredicted RBP29.46■■■□□ 2.31
VEGFA-211ENST00000476772 ARID3BQ8IVW6 561 aaPredicted RBP29.46■■■□□ 2.31
VEGFA-211ENST00000476772 OR7D4Q8NG98 312 aa29.46■■■□□ 2.31
VEGFA-211ENST00000476772 GBA3Q9H227 469 aa29.46■■■□□ 2.31
VEGFA-211ENST00000476772 CDC42EP4Q9H3Q1 356 aaKnown RBP29.46■■■□□ 2.31
VEGFA-211ENST00000476772 RSPH14Q9UHP6 348 aa29.46■■■□□ 2.31
VEGFA-211ENST00000476772 CDH22Q9UJ99 828 aa29.46■■■□□ 2.31
VEGFA-211ENST00000476772 TBC1D30Q9Y2I9 924 aa29.46■■■□□ 2.31
VEGFA-211ENST00000476772 NFKB1P19838 968 aa29.45■■■□□ 2.31
VEGFA-211ENST00000476772 TPSB2P20231 275 aa29.45■■■□□ 2.31
VEGFA-211ENST00000476772 USP4Q13107 963 aa29.45■■■□□ 2.31
VEGFA-211ENST00000476772 TPSAB1Q15661 275 aa29.45■■■□□ 2.31
VEGFA-211ENST00000476772 ZNF77Q15935 545 aa29.45■■■□□ 2.31
VEGFA-211ENST00000476772 HIF1AQ16665 826 aa29.45■■■□□ 2.31
VEGFA-211ENST00000476772 ANO4Q32M45 955 aa29.45■■■□□ 2.31
VEGFA-211ENST00000476772 FNBP1LQ5T0N5 605 aa29.45■■■□□ 2.31
VEGFA-211ENST00000476772 UBAP2Q5T6F2 1119 aaKnown RBP29.45■■■□□ 2.31
VEGFA-211ENST00000476772 ITPRIPL1Q6GPH6 555 aa29.45■■■□□ 2.31
VEGFA-211ENST00000476772 CARNMT1Q8N4J0 409 aa29.45■■■□□ 2.31
VEGFA-211ENST00000476772 BHMTQ93088 406 aa29.45■■■□□ 2.31
VEGFA-211ENST00000476772 GORASP1Q9BQQ3 440 aa29.45■■■□□ 2.31
VEGFA-211ENST00000476772 EPB41L4BQ9H329 900 aa29.45■■■□□ 2.31
VEGFA-211ENST00000476772 ILVBLA1L0T0 632 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 RGS19P49795 217 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 ARL4CP56559 192 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 CFAP58Q5T655 872 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 ANKRD54Q6NXT1 300 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 CEP128Q6ZU80 1094 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 GPR149Q86SP6 731 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 FATE1Q969F0 183 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 SAYSD1Q9NPB0 183 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 NUP210Q8TEM1 1887 aaPredicted RBP29.44■■■□□ 2.3
VEGFA-211ENST00000476772 PDE4DIPQ5VU43 2346 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 LUC7L3O95232 432 aaKnown RBP29.44■■■□□ 2.3
VEGFA-211ENST00000476772 IL10RBQ08334 325 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 SPDYCQ5MJ68 293 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 SYCE2Q6PIF2 218 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 TPGS1Q6ZTW0 290 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 CENPUQ71F23 418 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 DDI1Q8WTU0 396 aa29.44■■■□□ 2.3
VEGFA-211ENST00000476772 PABPC5Q96DU9 382 aaKnown RBP29.44■■■□□ 2.3
VEGFA-211ENST00000476772 PABPC3Q9H361 631 aaKnown RBP29.44■■■□□ 2.3
VEGFA-211ENST00000476772 RBM22Q9NW64 420 aaKnown RBP eCLIP29.44■■■□□ 2.36e-11■■■■■ 34.3
VEGFA-211ENST00000476772 H0Y626 953 aa29.43■■■□□ 2.3
VEGFA-211ENST00000476772 BANF1O75531 89 aa29.43■■■□□ 2.3
VEGFA-211ENST00000476772 HOXD9P28356 352 aaPredicted RBP29.43■■■□□ 2.3
VEGFA-211ENST00000476772 LMAN1P49257 510 aa29.43■■■□□ 2.3
VEGFA-211ENST00000476772 MTM1Q13496 603 aa29.43■■■□□ 2.3
VEGFA-211ENST00000476772 MSS51Q4VC12 460 aa29.43■■■□□ 2.3
VEGFA-211ENST00000476772 MPPE1Q53F39 396 aa29.43■■■□□ 2.3
VEGFA-211ENST00000476772 IL31Q6EBC2 164 aa29.43■■■□□ 2.3
VEGFA-211ENST00000476772 PPP1R21Q6ZMI0 780 aa29.43■■■□□ 2.3
VEGFA-211ENST00000476772 RELL1Q8IUW5 271 aa29.43■■■□□ 2.3
VEGFA-211ENST00000476772 IQCKQ8N0W5 287 aa29.43■■■□□ 2.3
VEGFA-211ENST00000476772 PDCD7Q8N8D1 485 aaKnown RBP29.43■■■□□ 2.3
VEGFA-211ENST00000476772 SERPINB12Q96P63 405 aa29.43■■■□□ 2.3
VEGFA-211ENST00000476772 ZIM3Q96PE6 472 aa29.43■■■□□ 2.3
VEGFA-211ENST00000476772 PRAMEF11O60813 436 aa29.42■■■□□ 2.3
VEGFA-211ENST00000476772 HLA-DQB2P05538 268 aa29.42■■■□□ 2.3
VEGFA-211ENST00000476772 TCF3P15923 654 aa29.42■■■□□ 2.3
VEGFA-211ENST00000476772 FSHRP23945 695 aa29.42■■■□□ 2.3
VEGFA-211ENST00000476772 PDIA2Q13087 525 aaKnown RBP29.42■■■□□ 2.3
VEGFA-211ENST00000476772 HNRNPDQ14103 355 aaKnown RBP29.42■■■□□ 2.3
VEGFA-211ENST00000476772 FASTKD3Q14CZ7 662 aaKnown RBP29.42■■■□□ 2.3
VEGFA-211ENST00000476772 FSCBQ5H9T9 825 aa29.42■■■□□ 2.3
VEGFA-211ENST00000476772 RNF219Q5W0B1 726 aaPredicted RBP29.42■■■□□ 2.3
VEGFA-211ENST00000476772 TRMT10CQ7L0Y3 403 aaKnown RBP29.42■■■□□ 2.3
VEGFA-211ENST00000476772 OTOP3Q7RTS5 596 aa29.42■■■□□ 2.3
VEGFA-211ENST00000476772 MCUQ8NE86 351 aa29.42■■■□□ 2.3
VEGFA-211ENST00000476772 SPON2Q9BUD6 331 aa29.42■■■□□ 2.3
VEGFA-211ENST00000476772 EIF2B3Q9NR50 452 aaKnown RBP29.42■■■□□ 2.3
VEGFA-211ENST00000476772 TTLL3Q9Y4R7 772 aa29.42■■■□□ 2.3
VEGFA-211ENST00000476772 GOLGA6BA6NDN3 693 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 RIPK2O43353 540 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 MAGEA4P43358 317 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 FAM193AP78312 1265 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 HP1BP3Q5SSJ5 553 aaPredicted RBP29.41■■■□□ 2.3
VEGFA-211ENST00000476772 ALS2CLQ60I27 953 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 LEKR1Q6ZMV7 388 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 NPAS3Q8IXF0 933 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 PDIK1LQ8N165 341 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 WFDC5Q8TCV5 224 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 C9orf72Q96LT7 481 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 PHACTR1Q9C0D0 580 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 PDFQ9HBH1 243 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 PLK2Q9NYY3 685 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 NINJ2Q9NZG7 142 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 PLAAQ9Y263 795 aa29.41■■■□□ 2.3
VEGFA-211ENST00000476772 NEBLO76041 1014 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 RENBPP51606 427 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 SLC10A7Q0GE19 358 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 CDH18Q13634 790 aa29.4■■■□□ 2.3
VEGFA-211ENST00000476772 ZNF534Q76KX8 674 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms