RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 PMPCAQ10713 525 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 TBL3Q12788 808 aaKnown RBP5.38□□□□□ -1.55
PTCD3-211ENST00000476215 MAPK7Q13164 816 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 IL13RA2Q14627 380 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 C5orf22Q49AR2 442 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 ISM2Q6H9L7 571 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 DEF8Q6ZN54 512 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 B4GALNT4Q76KP1 1039 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 DDIASQ8IXT1 998 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 SCAIQ8N9R8 606 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 HTRA1Q92743 480 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 HVCN1Q96D96 273 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 ZNF419Q96HQ0 510 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-211ENST00000476215 IFT27Q9BW83 186 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 SLC29A3Q9BZD2 475 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTCD3-211ENST00000476215 MROH8Q9H579 483 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 IL21RQ9HBE5 538 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 TRNAU1APQ9NX07 287 aaKnown RBP5.38□□□□□ -1.55
PTCD3-211ENST00000476215 AGO2Q9UKV8 859 aaKnown RBP5.38□□□□□ -1.55
PTCD3-211ENST00000476215 TRBV5-3A0A0A0MS03 114 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 KIR2DS5A0A0G2JLQ3 304 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 TMEM247A6NEH6 219 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 SH2D7A6NKC9 451 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-211ENST00000476215 KIR2DS3K7RE56 304 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 EYA2O00167 538 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 HBP1O60381 514 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 NEURL1O76050 574 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 IFIT1P09914 478 aaKnown RBP5.37□□□□□ -1.55
PTCD3-211ENST00000476215 HNF1BP35680 557 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 VAMP2P63027 116 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 PLK5Q496M5 336 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 ALG10Q5BKT4 473 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 ALG10BQ5I7T1 473 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 VWA5B1Q5TIE3 1220 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 RETSATQ6NUM9 610 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 AADACL2Q6P093 401 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 PAF1Q8N7H5 531 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 EME1Q96AY2 570 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 EVI5LQ96CN4 794 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 CLMNQ96JQ2 1002 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 NPLQ9BXD5 320 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-211ENST00000476215 TAOK3Q9H2K8 898 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 WASH6PQ9NQA3 447 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 THSD1Q9NS62 852 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 ALKBH4Q9NXW9 302 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 PGAP2Q9UHJ9 254 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 SLC13A4Q9UKG4 626 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 HSF4Q9ULV5 492 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 DHDHQ9UQ10 334 aa5.37□□□□□ -1.55
PTCD3-211ENST00000476215 C17orf100A8MU93 164 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 FOXO6A8MYZ6 492 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 CBX6O95503 412 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 LCKP06239 509 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 HNRNPA1P09651 372 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTCD3-211ENST00000476215 GJC1P36383 396 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 SKIV2L2P42285 1042 aaKnown RBP5.36□□□□□ -1.55
PTCD3-211ENST00000476215 MTNR1AP48039 350 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 NAA25Q14CX7 972 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 NFIL3Q16649 462 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 SMTNL2Q2TAL5 461 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 TTC39AQ5SRH9 613 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 C10orf25Q5T742 122 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 LCE1AQ5T7P2 110 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 CCDC70Q6NSX1 233 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 SHC4Q6S5L8 630 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 LRRC8DQ7L1W4 858 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 IGFN1Q86VF2 1251 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 HEATR4Q86WZ0 1026 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTCD3-211ENST00000476215 NANOGP1Q8N7R0 232 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 SLC44A5Q8NCS7 719 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 RPL36ALQ969Q0 106 aaKnown RBP5.36□□□□□ -1.55
PTCD3-211ENST00000476215 SH3KBP1Q96B97 665 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 CD180Q99467 661 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 HIPK3Q9H422 1215 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 TTC12Q9H892 705 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-211ENST00000476215 TUBA8Q9NY65 449 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-211ENST00000476215 HDAC6Q9UBN7 1215 aa5.36□□□□□ -1.55
PTCD3-211ENST00000476215 ZMYM2Q9UBW7 1377 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 TTBK1Q5TCY1 1321 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-211ENST00000476215 CCDC196A0A1B0GTZ2 297 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 A0A1B0GVC2 190 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 FAM90A7PA6NKC0 464 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 FAM90A22PA8MWA6 464 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 FAM90A12PA8MX19 464 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 FAM90A23PA8MXZ1 464 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 CNOT3O75175 753 aaKnown RBP5.35□□□□□ -1.55
PTCD3-211ENST00000476215 MOSPD3O75425 235 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 CD72P21854 359 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 PSMC2P35998 433 aaKnown RBP5.35□□□□□ -1.55
PTCD3-211ENST00000476215 PTPN9P43378 593 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 TUBP50607 506 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 POU5F1BQ06416 359 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 MTX1Q13505 466 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 TDGQ13569 410 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 KLF9Q13886 244 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-211ENST00000476215 ENTPD8Q5MY95 495 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 C6orf10Q5SRN2 563 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 TMEM268Q5VZI3 342 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms