RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 DHX35Q9H5Z1 703 aaKnown RBP11.88□□□□□ -0.51
BRD9-203ENST00000475706 FBXL12Q9NXK8 326 aa11.88□□□□□ -0.51
BRD9-203ENST00000475706 VPS51Q9UID3 782 aa11.88□□□□□ -0.51
BRD9-203ENST00000475706 ANKRD36A6QL64 1941 aa11.88□□□□□ -0.51
BRD9-203ENST00000475706 TRPM6Q9BX84 2022 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 CACNA1EQ15878 2313 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 MID1O15344 667 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 ATP9BO43861 1147 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 PRPSAP2O60256 369 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 FOXD2O60548 495 aaPredicted RBP11.87□□□□□ -0.51
BRD9-203ENST00000475706 MT-CO1P00395 513 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 IL1BP01584 269 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 CFIP05156 583 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 SRCP12931 536 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 MAOBP27338 520 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 EPHB2P29323 1055 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 L1CAMP32004 1257 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 SLC8A1P32418 973 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 DPP6P42658 865 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 MAPKAPK2P49137 400 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 GALCP54803 685 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 ADKP55263 362 aaKnown RBP11.87□□□□□ -0.51
BRD9-203ENST00000475706 ZBTB16Q05516 673 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 SFSWAPQ12872 951 aaKnown RBP11.87□□□□□ -0.51
BRD9-203ENST00000475706 ARID5BQ14865 1188 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 CST6Q15828 149 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 SYCP2LQ5T4T6 812 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 ARTNQ5T4W7 220 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 ZNF783Q6ZMS7 281 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 Q6ZVU0 165 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 DCAF4L2Q8NA75 395 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 OR8D1Q8WZ84 308 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 SNX19Q92543 992 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 FOXJ1Q92949 421 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 RMDN1Q96DB5 314 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 ZNF419Q96HQ0 510 aaPredicted RBP11.87□□□□□ -0.51
BRD9-203ENST00000475706 FAM129BQ96TA1 746 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 OMDQ99983 421 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 BTBD1Q9H0C5 482 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 THAP2Q9H0W7 228 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 PABPC3Q9H361 631 aaKnown RBP11.87□□□□□ -0.51
BRD9-203ENST00000475706 TMEM74BQ9NUR3 256 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 NDFIP2Q9NV92 336 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 TMEM248Q9NWD8 314 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 ZNF212Q9UDV6 495 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 CDV3Q9UKY7 258 aaKnown RBP11.87□□□□□ -0.51
BRD9-203ENST00000475706 SCML1Q9UN30 329 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 AP4E1Q9UPM8 1137 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 SPTBN4Q9H254 2564 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 PLXNA2O75051 1894 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 TMEM131Q92545 1883 aa11.87□□□□□ -0.51
BRD9-203ENST00000475706 A0A1W2PP55 124 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 FAM47DPA6NHR8 397 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 K7ERQ8 282 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 EEF2KO00418 725 aaKnown RBP11.86□□□□□ -0.51
BRD9-203ENST00000475706 SMAD6O43541 496 aaKnown RBP11.86□□□□□ -0.51
BRD9-203ENST00000475706 AKR1B10O60218 316 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 RNASEH2AO75792 299 aaKnown RBP11.86□□□□□ -0.51
BRD9-203ENST00000475706 MIPP30301 263 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 HNRNPH3P31942 346 aaKnown RBP11.86□□□□□ -0.51
BRD9-203ENST00000475706 ACSL1P33121 698 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 ACVRL1P37023 503 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 DNA2P51530 1060 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 AIF1P55008 147 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 TPI1P60174 286 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 IRX4P78413 519 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
BRD9-203ENST00000475706 ZNF252P-AS1Q0IIN9 211 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 POLD3Q15054 466 aaPredicted RBP11.86□□□□□ -0.51
BRD9-203ENST00000475706 TRIM61Q5EBN2 209 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 WDR45BQ5MNZ6 344 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 ERMARDQ5T6L9 678 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 DCAF12L1Q5VU92 463 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 DAB2IPQ5VWQ8 1189 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 RETSATQ6NUM9 610 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 NLRP14Q86W24 1093 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 HDDC3Q8N4P3 179 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 ARFGAP1Q8N6T3 406 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 NETO1Q8TDF5 533 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 FNIP1Q8TF40 1166 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 FRS2Q8WU20 508 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 ARHGEF2Q92974 986 aaKnown RBP11.86□□□□□ -0.51
BRD9-203ENST00000475706 ARHGEF26Q96DR7 871 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 BTBD6Q96KE9 485 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 SNRNP25Q9BV90 132 aaKnown RBP11.86□□□□□ -0.51
BRD9-203ENST00000475706 NUP85Q9BW27 656 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 NUSAP1Q9BXS6 441 aaKnown RBP11.86□□□□□ -0.51
BRD9-203ENST00000475706 RBSNQ9H1K0 784 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 MIR1-1HGQ9H1L0 117 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 CATSPERBQ9H7T0 1116 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 RXFP3Q9NSD7 469 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 PILRBQ9UKJ0 227 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 HS3ST2Q9Y278 367 aa11.86□□□□□ -0.51
BRD9-203ENST00000475706 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
BRD9-203ENST00000475706 TDRD6O60522 2096 aaKnown RBP11.85□□□□□ -0.51
BRD9-203ENST00000475706 AKR1B15C9JRZ8 316 aaPredicted RBP11.85□□□□□ -0.51
BRD9-203ENST00000475706 PLK4O00444 970 aa11.85□□□□□ -0.51
BRD9-203ENST00000475706 DAPK3O43293 454 aa11.85□□□□□ -0.51
BRD9-203ENST00000475706 RAMP2O60895 175 aa11.85□□□□□ -0.51
BRD9-203ENST00000475706 MFAP3LO75121 409 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms