RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 VSIG1Q86XK7 387 aa23.36■■□□□ 1.33
YIF1A-206ENST00000474986 RHOT1Q8IXI2 618 aa23.36■■□□□ 1.33
YIF1A-206ENST00000474986 PDLIM2Q96JY6 352 aa23.36■■□□□ 1.33
YIF1A-206ENST00000474986 RPL10LQ96L21 214 aaKnown RBP23.36■■□□□ 1.33
YIF1A-206ENST00000474986 LRRC19Q9H756 370 aa23.36■■□□□ 1.33
YIF1A-206ENST00000474986 SLCO3A1Q9UIG8 710 aa23.36■■□□□ 1.33
YIF1A-206ENST00000474986 HPCAL4Q9UM19 191 aa23.36■■□□□ 1.33
YIF1A-206ENST00000474986 DUSP10Q9Y6W6 482 aa23.36■■□□□ 1.33
YIF1A-206ENST00000474986 EDDM13A0A1B0GTR0 161 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 ZSCAN5CA6NGD5 496 aaPredicted RBP23.35■■□□□ 1.33
YIF1A-206ENST00000474986 ZNF487B1APH4 448 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 CBX4O00257 560 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 DCLK1O15075 740 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 SNAP91O60641 907 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 LILRB5O75023 590 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 HLA-EP13747 358 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 GJC1P36383 396 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 ACVRL1P37023 503 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 PLA2G5P39877 138 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 FNTBP49356 437 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 GEMIN4P57678 1058 aaKnown RBP23.35■■□□□ 1.33
YIF1A-206ENST00000474986 CCZ1BP86790 482 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 CCZ1P86791 482 aaPredicted RBP23.35■■□□□ 1.33
YIF1A-206ENST00000474986 DMWDQ09019 674 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 SH2D3CQ8N5H7 860 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 KCTD6Q8NC69 237 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 MDGA1Q8NFP4 955 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 FRS2Q8WU20 508 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 ATRIPQ8WXE1 791 aa23.35■■□□□ 1.33
YIF1A-206ENST00000474986 ATOH1Q92858 354 aaPredicted RBP23.35■■□□□ 1.33
YIF1A-206ENST00000474986 DDX56Q9NY93 547 aaKnown RBP23.35■■□□□ 1.33
YIF1A-206ENST00000474986 RASA4BC9J798 803 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 RASA4O43374 803 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 PSTPIP1O43586 416 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 BUB1O43683 1085 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 GABRG2P18507 467 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 IL4RP24394 825 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 DPYSL3Q14195 570 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 AFMIDQ63HM1 303 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 HEATR6Q6AI08 1181 aaKnown RBP23.34■■□□□ 1.33
YIF1A-206ENST00000474986 DAAM2Q86T65 1068 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 OR2T3Q8NH03 318 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 HMGB4Q8WW32 186 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 TSGA10Q9BZW7 698 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 KLC2Q9H0B6 622 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 PRSS16Q9NQE7 514 aa23.34■■□□□ 1.33
YIF1A-206ENST00000474986 BCCIPQ9P287 314 aaKnown RBP eCLIP23.34■■□□□ 1.33
YIF1A-206ENST00000474986 TTC34A8MYJ7 566 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 KDELR3O43731 214 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 SERPINB6P35237 376 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 PXNP49023 591 aaPredicted RBP23.33■■□□□ 1.33
YIF1A-206ENST00000474986 NUMBP49757 651 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 NAP1L1P55209 391 aaKnown RBP23.33■■□□□ 1.33
YIF1A-206ENST00000474986 SERINC3Q13530 473 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 ZFYVE27Q5T4F4 411 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 TMCO3Q6UWJ1 677 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 METTL3Q86U44 580 aaKnown RBP23.33■■□□□ 1.33
YIF1A-206ENST00000474986 ZNF366Q8N895 744 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 ATP11CQ8NB49 1132 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 FAF2Q96CS3 445 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 HMCESQ96FZ2 354 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 MRGPRX1Q96LB2 322 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 CALN1Q9BXU9 219 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 CEP44Q9C0F1 390 aa23.33■■□□□ 1.33
YIF1A-206ENST00000474986 ARHGAP42A6NI28 874 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 KRT86O43790 486 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 CD48P09326 243 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 CCDC175P0C221 793 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 SRCP12931 536 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 NDUFV2P19404 249 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 AMPD1P23109 780 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 GLDCP23378 1020 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 KDELR1P24390 212 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 NBL1P41271 181 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 SERPINH1P50454 418 aaKnown RBP23.32■■□□□ 1.32
YIF1A-206ENST00000474986 COPAP53621 1224 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 ARF5P84085 180 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 DLG2Q15700 870 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 C9orf64Q5T6V5 341 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 ZNF662Q6ZS27 426 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 ARHGAP12Q8IWW6 846 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 RNF10Q8N5U6 811 aaKnown RBP23.32■■□□□ 1.32
YIF1A-206ENST00000474986 CASKIN2Q8WXE0 1202 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 PTPRN2Q92932 1015 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 FAM122AQ96E09 287 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 MKRN2Q9H000 416 aaKnown RBP23.32■■□□□ 1.32
YIF1A-206ENST00000474986 SEMA4AQ9H3S1 761 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 PRDM16Q9HAZ2 1276 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 HYOU1Q9Y4L1 999 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 CKAP5Q14008 2032 aa23.32■■□□□ 1.32
YIF1A-206ENST00000474986 CHD5Q8TDI0 1954 aa23.31■■□□□ 1.32
YIF1A-206ENST00000474986 WDFY4Q6ZS81 3184 aa23.31■■□□□ 1.32
YIF1A-206ENST00000474986 SIN3BO75182 1162 aa23.31■■□□□ 1.32
YIF1A-206ENST00000474986 MT-CO1P00395 513 aa23.31■■□□□ 1.32
YIF1A-206ENST00000474986 ZBTB16Q05516 673 aa23.31■■□□□ 1.32
YIF1A-206ENST00000474986 BYSLQ13895 437 aaKnown RBP23.31■■□□□ 1.32
YIF1A-206ENST00000474986 ELAVL3Q14576 367 aaKnown RBP23.31■■□□□ 1.32
YIF1A-206ENST00000474986 USP39Q53GS9 565 aaKnown RBP23.31■■□□□ 1.32
YIF1A-206ENST00000474986 TMPRSS6Q8IU80 811 aa23.31■■□□□ 1.32
YIF1A-206ENST00000474986 PGBD3Q8N328 593 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms