RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 HAPLN3Q96S86 360 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 OMDQ99983 421 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 METTL5Q9NRN9 209 aaKnown RBP19.06■□□□□ 0.64
COL7A1-209ENST00000474432 VPS51Q9UID3 782 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 PPM1HQ9ULR3 514 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 ASPMQ8IZT6 3477 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 FAM221BA6H8Z2 402 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 E9PAM4 449 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 K7ERQ8 282 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 RNF103O00237 685 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 MCF2LO15068 1137 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 PROS1P07225 676 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 RDXP35241 583 aaKnown RBP19.05■□□□□ 0.64
COL7A1-209ENST00000474432 CCR5P51681 352 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 STX1AQ16623 288 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 ZNF423Q2M1K9 1284 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 CCDC14Q49A88 953 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 SASS6Q6UVJ0 657 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 Q6ZVU0 165 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 RAB44Q7Z6P3 723 aaPredicted RBP19.05■□□□□ 0.64
COL7A1-209ENST00000474432 GLRX5Q86SX6 157 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 FAM131BQ86XD5 332 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 ERGIC2Q96RQ1 377 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 PPP1R9BQ96SB3 815 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 MAGEB5Q9BZ81 275 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 SLC25A13Q9UJS0 675 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 KLK13Q9UKR3 277 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 BTBD3Q9Y2F9 522 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 DAAM1Q9Y4D1 1078 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 PCDHGB2Q9Y5G2 931 aa19.05■□□□□ 0.64
COL7A1-209ENST00000474432 A0A1W2PR77 199 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 LRRC72A6NJI9 287 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 C2CD4BA6NLJ0 364 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 H0Y8X5 98 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 VILLO15195 856 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 SMAD6O43541 496 aaKnown RBP19.04■□□□□ 0.64
COL7A1-209ENST00000474432 LATO43561 262 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 CTSLP07711 333 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 RHOCP08134 193 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 GLDCP23378 1020 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 STAT1P42224 750 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 PPP2CBP62714 309 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 RACK1P63244 317 aaKnown RBP19.04■□□□□ 0.64
COL7A1-209ENST00000474432 PPP2CAP67775 309 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 SFSWAPQ12872 951 aaKnown RBP19.04■□□□□ 0.64
COL7A1-209ENST00000474432 TEAD4Q15561 434 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 C15orf59Q2T9L4 293 aaPredicted RBP19.04■□□□□ 0.64
COL7A1-209ENST00000474432 ACCSLQ4AC99 568 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 UNQ6494/PRO21346Q6UXR6 183 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.04■□□□□ 0.64
COL7A1-209ENST00000474432 TFAP2DQ7Z6R9 452 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 SETD3Q86TU7 594 aaPredicted RBP19.04■□□□□ 0.64
COL7A1-209ENST00000474432 CHCHD4Q8N4Q1 142 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 MSANTD4Q8NCY6 345 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 RXFP2Q8WXD0 754 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 C11orf70Q9BRQ4 267 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 MUC3BQ9H195 1237 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 TMEM51Q9NW97 253 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 ARHGAP20Q9P2F6 1191 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 NEUROG3Q9Y4Z2 214 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 PAXBP1Q9Y5B6 917 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 PLXNB3Q9ULL4 1909 aa19.04■□□□□ 0.64
COL7A1-209ENST00000474432 ALOX15BO15296 676 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 RTN2O75298 545 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 ZNF821O75541 412 aaPredicted RBP19.03■□□□□ 0.64
COL7A1-209ENST00000474432 ZMPSTE24O75844 475 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 FTH1P19P0C7X4 201 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 ATP1A3P13637 1013 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 TAS2R38P59533 333 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 ATP11AP98196 1134 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 MANEALQ5VSG8 457 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 AGBL4Q5VU57 503 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 SLCO6A1Q86UG4 719 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 DCAF4L2Q8NA75 395 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 OR7D4Q8NG98 312 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 OR2A12Q8NGT7 310 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 OR14C36Q8NHC7 312 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 PIP4K2CQ8TBX8 421 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 OR8D1Q8WZ84 308 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 CENPIQ92674 756 aaPredicted RBP19.03■□□□□ 0.64
COL7A1-209ENST00000474432 TOR4AQ9NXH8 423 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 TMEM63CQ9P1W3 806 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 NEU3Q9UQ49 428 aa19.03■□□□□ 0.64
COL7A1-209ENST00000474432 PTPRBP23467 1997 aa19.02■□□□□ 0.64
COL7A1-209ENST00000474432 TCRBV5S1A1TA0A578 114 aa19.02■□□□□ 0.64
COL7A1-209ENST00000474432 PLRG1O43660 514 aaKnown RBP19.02■□□□□ 0.64
COL7A1-209ENST00000474432 SRGAP2O75044 1071 aa19.02■□□□□ 0.64
COL7A1-209ENST00000474432 RRM1P23921 792 aa19.02■□□□□ 0.64
COL7A1-209ENST00000474432 ADRA1BP35368 520 aa19.02■□□□□ 0.64
COL7A1-209ENST00000474432 GSCP56915 257 aaPredicted RBP19.02■□□□□ 0.64
COL7A1-209ENST00000474432 CNTN1Q12860 1018 aa19.02■□□□□ 0.64
COL7A1-209ENST00000474432 SHBQ15464 509 aa19.02■□□□□ 0.64
COL7A1-209ENST00000474432 CLEC16AQ2KHT3 1053 aa19.02■□□□□ 0.64
COL7A1-209ENST00000474432 CCDC183Q5T5S1 534 aa19.02■□□□□ 0.64
COL7A1-209ENST00000474432 ACBD5Q5T8D3 534 aaPredicted RBP19.02■□□□□ 0.64
COL7A1-209ENST00000474432 LRRC31Q6UY01 552 aa19.02■□□□□ 0.64
COL7A1-209ENST00000474432 LINGO4Q6UY18 593 aa19.02■□□□□ 0.64
COL7A1-209ENST00000474432 TRIM72Q6ZMU5 477 aa19.02■□□□□ 0.64
COL7A1-209ENST00000474432 PHF13Q86YI8 300 aaPredicted RBP19.02■□□□□ 0.64
COL7A1-209ENST00000474432 PNPLA1Q8N8W4 532 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms