RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 NAA35Q5VZE5 725 aa20.89■□□□□ 0.93
PDLIM4-206ENST00000474421 TBC1D3GQ6DHY5 549 aa20.89■□□□□ 0.93
PDLIM4-206ENST00000474421 TBC1D3CQ6IPX1 549 aa20.89■□□□□ 0.93
PDLIM4-206ENST00000474421 LAYNQ6UX15 382 aa20.89■□□□□ 0.93
PDLIM4-206ENST00000474421 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.89■□□□□ 0.93
PDLIM4-206ENST00000474421 TBC1D3Q8IZP1 549 aaPredicted RBP20.89■□□□□ 0.93
PDLIM4-206ENST00000474421 ANKRD20A12PQ8NF67 263 aa20.89■□□□□ 0.93
PDLIM4-206ENST00000474421 OR52K2Q8NGK3 314 aa20.89■□□□□ 0.93
PDLIM4-206ENST00000474421 CPA5Q8WXQ8 436 aa20.89■□□□□ 0.93
PDLIM4-206ENST00000474421 FAM131CQ96AQ9 280 aa20.89■□□□□ 0.93
PDLIM4-206ENST00000474421 HAPLN3Q96S86 360 aa20.89■□□□□ 0.93
PDLIM4-206ENST00000474421 VPS16Q9H269 839 aa20.89■□□□□ 0.93
PDLIM4-206ENST00000474421 PPM1HQ9ULR3 514 aa20.89■□□□□ 0.93
PDLIM4-206ENST00000474421 H0Y8X5 98 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 DRD3P35462 400 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 FLT3P36888 993 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 CLCN6P51797 869 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 CDR2Q01850 454 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 CCDC15Q0P6D6 951 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 KRT31Q15323 416 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 ALFQ53S48 1182 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 RBM43Q6ZSC3 357 aaKnown RBP20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 Q6ZVU0 165 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 PRPF39Q86UA1 669 aaKnown RBP20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 ZNF683Q8IZ20 524 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 ZCCHC14Q8WYQ9 949 aaKnown RBP20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 SERAC1Q96JX3 654 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 GANQ9H2C0 597 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 ANLNQ9NQW6 1124 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 TMEM59LQ9UK28 342 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 CFAP47Q6ZTR5 3102 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 SPEGQ15772 3267 aa20.88■□□□□ 0.93
PDLIM4-206ENST00000474421 IGLV3-10A0A075B6K4 115 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 A0A1B0GTQ1 180 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 E9PAM4 449 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 KCNK3O14649 394 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 YKT6O15498 198 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 LATO43561 262 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 GFPT2O94808 682 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 OR1E1P30953 314 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 POLR2FP61218 127 aaKnown RBP20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 KCNT1Q5JUK3 1230 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 ZNF783Q6ZMS7 281 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 TRIM72Q6ZMU5 477 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 BNIPLQ7Z465 357 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 SLCO6A1Q86UG4 719 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 PNPLA1Q8N8W4 532 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 DCAF4L2Q8NA75 395 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 ATP11CQ8NB49 1132 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 PIP4K2CQ8TBX8 421 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 ELF4Q99607 663 aaPredicted RBP20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 EBF2Q9HAK2 575 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 GDF3Q9NR23 364 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 FAM207AQ9NSI2 230 aaPredicted RBP20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 VPS51Q9UID3 782 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 NOCTQ9UK39 431 aaKnown RBP20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 DMTF1Q9Y222 760 aa20.87■□□□□ 0.93
PDLIM4-206ENST00000474421 I6L893 689 aaPredicted RBP20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 TNFSF14O43557 240 aa20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 PLRG1O43660 514 aaKnown RBP20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 SRCP12931 536 aa20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 SOX5P35711 763 aa20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 C2CD6Q53TS8 623 aa20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 NAPEPLDQ6IQ20 393 aa20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 SASS6Q6UVJ0 657 aa20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 CFAP57Q96MR6 1250 aa20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 PSMB7Q99436 277 aa20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 ANO10Q9NW15 660 aa20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 SARDHQ9UL12 918 aa20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 BTBD3Q9Y2F9 522 aa20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 SNX10Q9Y5X0 201 aa20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 WDFY3Q8IZQ1 3526 aa20.86■□□□□ 0.93
PDLIM4-206ENST00000474421 A0A1W2PR77 199 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 ILVBLA1L0T0 632 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 GOLGA6L22H0YM25 854 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 BNIP3LO60238 219 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 MAGEC1O60732 1142 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 SRGAP2O75044 1071 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 RTN2O75298 545 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 CYP1A1P04798 512 aaPredicted RBP20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 MMP8P22894 467 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 STAT1P42224 750 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 ARRB1P49407 418 aaPredicted RBP20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 JAM2P57087 298 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 CNTN1Q12860 1018 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 ARL13BQ3SXY8 428 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 AGBL4Q5VU57 503 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 TFAP2DQ7Z6R9 452 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 TRIM69Q86WT6 500 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 OXR1Q8N573 874 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 SLC20A1Q8WUM9 679 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 ZYG11BQ9C0D3 744 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 PREBQ9HCU5 417 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 METTL5Q9NRN9 209 aaKnown RBP20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 FANCLQ9NW38 375 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 MPP6Q9NZW5 540 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 PPARGC1AQ9UBK2 798 aaKnown RBP20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 PTPRBP23467 1997 aa20.85■□□□□ 0.93
PDLIM4-206ENST00000474421 TLR4O00206 839 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 SNAP91O60641 907 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms