RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 HERC6Q8IVU3 1022 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 SLC25A41Q8N5S1 370 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 MYRIPQ8NFW9 859 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 BICD2Q8TD16 824 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 WIPF2Q8TF74 440 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 HDAC7Q8WUI4 952 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 LPAR1Q92633 364 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 KCNJ9Q92806 393 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 ZNF333Q96JL9 665 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 NLRP4Q96MN2 994 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 ZNF48Q96MX3 618 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 WACQ9BTA9 647 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 CLPBQ9H078 707 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 PNRC2Q9NPJ4 139 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 SEMA4BQ9NPR2 832 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 THAP1Q9NVV9 213 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 ELOVL5Q9NYP7 299 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 KLQ9UEF7 1012 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 UTS2RQ9UKP6 389 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 DHDHQ9UQ10 334 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 AFG3L2Q9Y4W6 797 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 C17orf102A2RUQ5 167 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 MYMKA6NI61 221 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 ADAM10O14672 748 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 SYN3O14994 580 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 MDM4O15151 490 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 NEURL1O76050 574 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 OAZ2O95190 189 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 IFNA2P01563 188 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 MMP3P08254 477 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 ACP5P13686 325 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 PRF1P14222 555 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 PRKCHP24723 683 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 GJC1P36383 396 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 MVDP53602 400 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 TLE2Q04725 743 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 UBE3AQ05086 875 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 RABEP1Q15276 862 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 TAF5Q15542 800 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 SMTNL2Q2TAL5 461 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 HSP90AB4PQ58FF6 505 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 ZNF484Q5JVG2 852 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 TMEM268Q5VZI3 342 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 SYNE3Q6ZMZ3 975 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 PIP4P1Q86T03 277 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 TMC8Q8IU68 726 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 BRSK2Q8IWQ3 736 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 ZDHHC23Q8IYP9 409 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 FAM110DQ8TAY7 271 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 CSGALNACT1Q8TDX6 532 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 USP13Q92995 863 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 RBM17Q96I25 401 aaKnown RBP3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 CD180Q99467 661 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 NPLQ9BXD5 320 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 Q9N2J8 555 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 TMEM248Q9NWD8 314 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 MSRB1Q9NZV6 116 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 LUZP4Q9P127 313 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 HEY2Q9UBP5 337 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 CD207Q9UJ71 328 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 PCDHA12Q9UN75 941 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 OSGIN2Q9Y236 505 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 DNAJC16Q9Y2G8 782 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 GPR52Q9Y2T5 361 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 ZNF521Q96K83 1311 aa3.58□□□□□ -1.84
ECHDC1-213ENST00000474240 IGLV5-39A0A0G2JS06 123 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 FAM90A10PA6NDY2 464 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 CXorf65A6NEN9 183 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 SPTLC2O15270 562 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 RNMTO43148 476 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 CYP21A2P08686 494 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 RXRAP19793 462 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 SCP2P22307 547 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 YWHAQP27348 245 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 TYK2P29597 1187 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 ARL1P40616 181 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 NR4A2P43354 598 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 RASSF2P50749 326 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 CCT4P50991 539 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 CLCNKBP51801 687 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 GAD2Q05329 585 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 SLC12A1Q13621 1099 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 ARL13AQ5H913 290 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 TTLL5Q6EMB2 1281 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 MTFR2Q6P444 385 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 LVRNQ6Q4G3 990 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 KIAA1324Q6UXG2 1013 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 CYP26C1Q6V0L0 522 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 BBS12Q6ZW61 710 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 LRRTM4Q86VH4 590 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 CCDC25Q86WR0 208 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 VPS52Q8N1B4 723 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 FAR1Q8WVX9 515 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 MASTLQ96GX5 879 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 COG8Q96MW5 612 aa3.57□□□□□ -1.84
ECHDC1-213ENST00000474240 TWNKQ96RR1 684 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms