RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 PTP4A2Q12974 167 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 ALFQ53S48 1182 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 EFHC2Q5JST6 749 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 SLFN11Q7Z7L1 901 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 ZNF683Q8IZ20 524 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 STK40Q8N2I9 435 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 CENPIQ92674 756 aaPredicted RBP20.99■□□□□ 0.95
SNX13-206ENST00000474067 TBC1D31Q96DN5 1066 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 PPP1R16AQ96I34 528 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 PCDHB18PQ96TA0 734 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 CEP44Q9C0F1 390 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 PARVAQ9NVD7 372 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 AIPL1Q9NZN9 384 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 BZW2Q9Y6E2 419 aaKnown RBP20.99■□□□□ 0.95
SNX13-206ENST00000474067 DMXL1Q9Y485 3027 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 CACNA1AO00555 2505 aa20.99■□□□□ 0.95
SNX13-206ENST00000474067 EIF3CLB5ME19 914 aaKnown RBP20.98■□□□□ 0.95
SNX13-206ENST00000474067 CNTN5O94779 1100 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 PRNPP04156 253 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 RHOQP17081 205 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 HTR7P34969 479 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 CCR5P51681 352 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 GRIK2Q13002 908 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 SEMA3BQ13214 749 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 SUZ12Q15022 739 aaKnown RBP20.98■□□□□ 0.95
SNX13-206ENST00000474067 RWDD4Q6NW29 188 aaKnown RBP20.98■□□□□ 0.95
SNX13-206ENST00000474067 TFAP2DQ7Z6R9 452 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 FRS2Q8WU20 508 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 BIRC7Q96CA5 298 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 FAM129BQ96TA1 746 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 EIF3CQ99613 913 aaKnown RBP20.98■□□□□ 0.95
SNX13-206ENST00000474067 CNPY3Q9BT09 278 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 ADAM33Q9BZ11 813 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 C6orf106Q9H6K1 298 aaPredicted RBP20.98■□□□□ 0.95
SNX13-206ENST00000474067 ATP13A1Q9HD20 1204 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 MPP6Q9NZW5 540 aa20.98■□□□□ 0.95
SNX13-206ENST00000474067 FAM47DPA6NHR8 397 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 LRRC53A6NM62 1247 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 TEX33O43247 280 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 GZMAP12544 262 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 RFC1P35251 1148 aaPredicted RBP20.97■□□□□ 0.95
SNX13-206ENST00000474067 GALCP54803 685 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 RACK1P63244 317 aaKnown RBP20.97■□□□□ 0.95
SNX13-206ENST00000474067 GNA12Q03113 381 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 KLHL30Q0D2K2 578 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 SCAPQ12770 1279 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 IQCB1Q15051 598 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 C15orf59Q2T9L4 293 aaPredicted RBP20.97■□□□□ 0.95
SNX13-206ENST00000474067 TRNP1Q6NT89 227 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 WDR59Q6PJI9 974 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 MCOLN2Q8IZK6 566 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 OR14C36Q8NHC7 312 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 JOSD2Q8TAC2 188 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 BAP1Q92560 729 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 EPAS1Q99814 870 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 FUCA2Q9BTY2 467 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 SPON2Q9BUD6 331 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 ACE2Q9BYF1 805 aaPredicted RBP20.97■□□□□ 0.95
SNX13-206ENST00000474067 MAGEH1Q9H213 219 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 NEUROG2Q9H2A3 272 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 MTG2Q9H4K7 406 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 CATSPERBQ9H7T0 1116 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 VPS51Q9UID3 782 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 ANGPTL2Q9UKU9 493 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 PCDHB9Q9Y5E1 797 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 SCINQ9Y6U3 715 aa20.97■□□□□ 0.95
SNX13-206ENST00000474067 A0A1W2PPC4 97 aa20.96■□□□□ 0.95
SNX13-206ENST00000474067 ZSCAN5CA6NGD5 496 aaPredicted RBP20.96■□□□□ 0.95
SNX13-206ENST00000474067 CBX4O00257 560 aa20.96■□□□□ 0.95
SNX13-206ENST00000474067 MAGEC1O60732 1142 aa20.96■□□□□ 0.95
SNX13-206ENST00000474067 MYBL1P10243 752 aa20.96■□□□□ 0.95
SNX13-206ENST00000474067 SRCP12931 536 aa20.96■□□□□ 0.95
SNX13-206ENST00000474067 PRKCIP41743 596 aa20.96■□□□□ 0.95
SNX13-206ENST00000474067 C21orf59P57076 290 aa20.96■□□□□ 0.95
SNX13-206ENST00000474067 INAVAQ3KP66 663 aa20.96■□□□□ 0.95
SNX13-206ENST00000474067 IRF2BP2Q7Z5L9 587 aa20.96■□□□□ 0.95
SNX13-206ENST00000474067 PRPF39Q86UA1 669 aaKnown RBP20.96■□□□□ 0.95
SNX13-206ENST00000474067 PCDH20Q8N6Y1 951 aaKnown RBP20.96■□□□□ 0.95
SNX13-206ENST00000474067 TMIEQ8NEW7 156 aa20.96■□□□□ 0.95
SNX13-206ENST00000474067 MCEEQ96PE7 176 aa20.96■□□□□ 0.95
SNX13-206ENST00000474067 MRPL47Q9HD33 250 aaKnown RBP20.96■□□□□ 0.95
SNX13-206ENST00000474067 ANLNQ9NQW6 1124 aa20.96■□□□□ 0.95
SNX13-206ENST00000474067 TMEM248Q9NWD8 314 aa20.96■□□□□ 0.95
SNX13-206ENST00000474067 TBC1D3DA0A087WVF3 549 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 TBC1D3IA0A087WXS9 549 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 TBC1D3EA0A087X179 549 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 TBC1D3KA0A087X1G2 549 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 FAM170AA1A519 330 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 TBC1D3FA6NER0 549 aaPredicted RBP20.95■□□□□ 0.94
SNX13-206ENST00000474067 TBC1D3LB9A6J9 549 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 RNF8O76064 485 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 TRIM16O95361 564 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 PLEKP08567 350 aaPredicted RBP20.95■□□□□ 0.94
SNX13-206ENST00000474067 TBC1D3HP0C7X1 549 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 L1CAMP32004 1257 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 IRAK1P51617 712 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 ADPRHP54922 357 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 HDAC4P56524 1084 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 UBASH3AP57075 661 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 ZNF252P-AS1Q0IIN9 211 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms