RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 METAP1P53582 386 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 RPL7AP62424 266 aaKnown RBP18.39■□□□□ 0.53
UPF3A-203ENST00000474056 KRT83P78385 493 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 FANCCQ00597 558 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 GRIK2Q13002 908 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 DLG2Q15700 870 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 ASIC2Q16515 512 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 PPP1R15BQ5SWA1 713 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 C6orf118Q5T5N4 469 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 FAM72AQ5TYM5 149 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 MANEALQ5VSG8 457 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 FAM72DQ6L9T8 149 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 Q6ZVU0 165 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 FAM72BQ86X60 149 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 DNAAF5Q86Y56 855 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 MINDY1Q8N5J2 469 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 DCAF4L2Q8NA75 395 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 C1orf216Q8TAB5 229 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 C2orf49Q9BVC5 232 aaPredicted RBP18.39■□□□□ 0.53
UPF3A-203ENST00000474056 NEUROG2Q9H2A3 272 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 PPARGC1AQ9UBK2 798 aaKnown RBP18.39■□□□□ 0.53
UPF3A-203ENST00000474056 OR12D3Q9UGF7 316 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 HS3ST2Q9Y278 367 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 GIPC1O14908 333 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 ATMINO43313 823 aaPredicted RBP18.38■□□□□ 0.53
UPF3A-203ENST00000474056 RNASEH2AO75792 299 aaKnown RBP18.38■□□□□ 0.53
UPF3A-203ENST00000474056 ADH1BP00325 375 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 IL1BP01584 269 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 PTMSP20962 102 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 NOVA1P51513 510 aaKnown RBP18.38■□□□□ 0.53
UPF3A-203ENST00000474056 NRG1Q02297 640 aaPredicted RBP18.38■□□□□ 0.53
UPF3A-203ENST00000474056 SFMBT2Q5VUG0 894 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 PSAPL1Q6NUJ1 521 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 ZNF571Q7Z3V5 609 aaPredicted RBP18.38■□□□□ 0.53
UPF3A-203ENST00000474056 DRC7Q8IY82 874 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 HDDC3Q8N4P3 179 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 BIRC7Q96CA5 298 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 OMDQ99983 421 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 OSBPL2Q9H1P3 480 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 NDFIP2Q9NV92 336 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 AIPL1Q9NZN9 384 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 ADAMTS1Q9UHI8 967 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 SARDHQ9UL12 918 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 NEU3Q9UQ49 428 aa18.38■□□□□ 0.53
UPF3A-203ENST00000474056 ILVBLA1L0T0 632 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 FAM47DPA6NHR8 397 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 K7ERQ8 282 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 PLK4O00444 970 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 BNIP3LO60238 219 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 OPHN1O60890 802 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 LRIG2O94898 1065 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 IGHV4-34P06331 123 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 C5AR1P21730 350 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 DRD3P35462 400 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 PRKCIP41743 596 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 ZNF143P52747 638 aaPredicted RBP18.37■□□□□ 0.53
UPF3A-203ENST00000474056 GALCP54803 685 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 TPM4P67936 248 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 ZSCAN23Q3MJ62 389 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 N4BP2L1Q5TBK1 243 aaPredicted RBP18.37■□□□□ 0.53
UPF3A-203ENST00000474056 NCEH1Q6PIU2 408 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 LRSAM1Q6UWE0 723 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 LINGO4Q6UY18 593 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 NLRP14Q86W24 1093 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 ATP11CQ8NB49 1132 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 OR8D1Q8WZ84 308 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 NTAN1Q96AB6 310 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 ORAI3Q9BRQ5 295 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 FZD4Q9ULV1 537 aa18.37■□□□□ 0.53
UPF3A-203ENST00000474056 SMAD6O43541 496 aaKnown RBP18.36■□□□□ 0.53
UPF3A-203ENST00000474056 GJB3O75712 270 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 GOT1P17174 413 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 PBX1P40424 430 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 ADPRHP54922 357 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 BNC1Q01954 994 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 OGDHQ02218 1023 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 SFSWAPQ12872 951 aaKnown RBP18.36■□□□□ 0.53
UPF3A-203ENST00000474056 FIGNQ5HY92 759 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 KIAA0895LQ68EN5 471 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 RWDD4Q6NW29 188 aaKnown RBP18.36■□□□□ 0.53
UPF3A-203ENST00000474056 DCUN1D2Q6PH85 259 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 PYROXD2Q8N2H3 581 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 DEFB124Q8NES8 71 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 PIP4K2CQ8TBX8 421 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 TBC1D31Q96DN5 1066 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 VCPIP1Q96JH7 1222 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 EDEM3Q9BZQ6 932 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 ATP13A1Q9HD20 1204 aa18.36■□□□□ 0.53
UPF3A-203ENST00000474056 CBX4O00257 560 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 DDX3XO00571 662 aaKnown RBP eCLIP18.35■□□□□ 0.533e-7■■■■□ 19.9
UPF3A-203ENST00000474056 MCF2LO15068 1137 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 ZMPSTE24O75844 475 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 CTSLP07711 333 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 PLEKP08567 350 aaPredicted RBP18.35■□□□□ 0.53
UPF3A-203ENST00000474056 SKILP12757 684 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 CSRP1P21291 193 aaKnown RBP18.35■□□□□ 0.53
UPF3A-203ENST00000474056 CSNK1EP49674 416 aaKnown RBP18.35■□□□□ 0.53
UPF3A-203ENST00000474056 UBASH3AP57075 661 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 ARF5P84085 180 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 GNA12Q03113 381 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms