RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 LEXMQ3ZCV2 418 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF568Q3ZCX4 644 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 CAVIN4Q5BKX8 364 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 IGSF11Q5DX21 431 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 CNNM4Q6P4Q7 775 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 EPM2AIP1Q7L775 607 aaPredicted RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 AKAP14Q86UN6 197 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 AADATQ8N5Z0 425 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 UBR7Q8N806 425 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ASCC1Q8N9N2 400 aaKnown RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 PDPRQ8NCN5 879 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 PSPC1Q8WXF1 523 aaKnown RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TRIB2Q92519 343 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ISOC1Q96CN7 298 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC39A13Q96H72 371 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 CRAMP1Q96RY5 1269 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TRIM51Q9BSJ1 452 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 C1orf50Q9BV19 199 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 MLXIPLQ9NP71 852 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 GJB4Q9NTQ9 266 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 RIC8BQ9NVN3 520 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 GDAP2Q9NXN4 497 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ASIC3Q9UHC3 531 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 GTF2IRD1Q9UHL9 959 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ATP6V1HQ9UI12 483 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 SMG5Q9UPR3 1016 aaKnown RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 POLHQ9Y253 713 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 MYH4Q9Y623 1939 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 PCDH11YQ9BZA8 1340 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 PRPF4O43172 522 aaKnown RBP eCLIP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 MTSS1O43312 755 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 NDUFA2O43678 99 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 KLHL41O60662 606 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 CDH16O75309 829 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ITGB3P05106 788 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 SERPING1P05155 500 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 COL6A1P12109 1028 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 HSPA6P17066 643 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ITIH1P19827 911 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 POU3F2P20265 443 aaPredicted RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ITGAXP20702 1163 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 KLRC1P26715 233 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 HADHAP40939 763 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 PTPN9P43378 593 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC26A2P50443 739 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ETV1P50549 477 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 BMXP51813 675 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 YWHAGP61981 247 aaKnown RBP eCLIP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 RUNX1T1Q06455 604 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TNK2Q07912 1038 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 MRPL28Q13084 256 aaKnown RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TBCCQ15814 346 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ZBED5Q49AG3 693 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 EFHC1Q5JVL4 640 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 LPCAT4Q643R3 524 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 CENPUQ71F23 418 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 MAMDC2Q7Z304 686 aaPredicted RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 FGD2Q7Z6J4 655 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ZAR1Q86SH2 424 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 SYCE1Q8N0S2 351 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 METTL13Q8N6R0 699 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 SIMC1Q8NDZ2 872 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 HM13Q8TCT9 377 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TTC17Q96AE7 1141 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 VPS33AQ96AX1 596 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 SNX18Q96RF0 628 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 DOK1Q99704 481 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 LBHD1Q9BQE6 289 aaPredicted RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 MCMBPQ9BTE3 642 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 HDAC8Q9BY41 377 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 RHOBTB2Q9BYZ6 727 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 CELF4Q9BZC1 486 aaKnown RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TRIM15Q9C019 465 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 C1orf21Q9H246 121 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 FOXP1Q9H334 677 aaPredicted RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 LIN28AQ9H9Z2 209 aaKnown RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 GRHL1Q9NZI5 618 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC7A8Q9UHI5 535 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 RIMKLBQ9ULI2 386 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 PACSIN2Q9UNF0 486 aaPredicted RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 PLA2G4CQ9UP65 541 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 AP3M1Q9Y2T2 418 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 HEMK1Q9Y5R4 338 aaPredicted RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 DDX60Q8IY21 1712 aaKnown RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ZMYM2Q9UBW7 1377 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 ABCB11O95342 1321 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 RBBP6Q7Z6E9 1792 aaKnown RBP5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 CLRN2A0PK11 232 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 MAGEB16A2A368 324 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 SNAP91O60641 907 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 CRTAMO95727 393 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 GSNP06396 782 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 CREB1P16220 341 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 RRM2P31350 389 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 TRIM23P36406 574 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 BMPR1AP36894 532 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 ECI1P42126 302 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 MAPKAPK2P49137 400 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 MAPK7Q13164 816 aa5.24□□□□□ -1.57
TMEM39A-206ENST00000473684 ITGADQ13349 1161 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms