RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 C2orf49Q9BVC5 232 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-217ENST00000473348 C8orf33Q9H7E9 229 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-217ENST00000473348 HOMER3Q9NSC5 361 aa12.83□□□□□ -0.36
TRAPPC12-217ENST00000473348 IPO11Q9UI26 975 aaKnown RBP12.83□□□□□ -0.36
TRAPPC12-217ENST00000473348 VPS51Q9UID3 782 aa12.83□□□□□ -0.36
TRAPPC12-217ENST00000473348 INTS6Q9UL03 887 aaKnown RBP12.83□□□□□ -0.36
TRAPPC12-217ENST00000473348 DNPEPQ9ULA0 475 aa12.83□□□□□ -0.36
TRAPPC12-217ENST00000473348 HPCAL4Q9UM19 191 aa12.83□□□□□ -0.36
TRAPPC12-217ENST00000473348 HACD1B0YJ81 288 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 CCDC188H7C350 402 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 J3KR12 359 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 KDELR3O43731 214 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 SNAP91O60641 907 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 MAFKO60675 156 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 VAV1P15498 845 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 IL10RBQ08334 325 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 MESP2Q0VG99 397 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 AP1B1Q10567 949 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 BYSLQ13895 437 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 PRKD1Q15139 912 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 OASLQ15646 514 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 PREPLQ4J6C6 727 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 SLC45A4Q5BKX6 768 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 IER5LQ5T953 404 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 MBLAC2Q68D91 279 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 DARS2Q6PI48 645 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 TXNDC11Q6PKC3 985 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 TPRG1Q6ZUI0 275 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 ADIPOR2Q86V24 386 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 CCDC13Q8IYE1 715 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 SPATA4Q8NEY3 305 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 NKD2Q969F2 451 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 MAGOHBQ96A72 148 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 MSANTD3Q96H12 275 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 TSGA13Q96PP4 275 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 P2RY13Q9BPV8 354 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 BRD8Q9H0E9 1235 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 PDFQ9HBH1 243 aa12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 RRAGDQ9NQL2 400 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 RBM12Q9NTZ6 932 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-217ENST00000473348 BCLAF3A2AJT9 711 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 ZSCAN5CA6NGD5 496 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 PRAMEF11O60813 436 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 ZMPSTE24O75844 475 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 KAT7O95251 611 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 APODP05090 189 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 GLULP15104 373 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 POLR2EP19388 210 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 CCNCP24863 283 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 GRIA2P42262 883 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 CLCN6P51797 869 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 ARF5P84085 180 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 ZNF33AQ06730 810 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 C2orf54Q08AI8 447 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 EIF4HQ15056 248 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 MLF2Q15773 248 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 SLC44A4Q53GD3 710 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 TJAP1Q5JTD0 557 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 TMEM215Q68D42 235 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 HEATR6Q6AI08 1181 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 TIGD7Q6NT04 549 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 TTC27Q6P3X3 843 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 DRICH1Q6PGQ1 229 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 LEKR1Q6ZMV7 388 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 SUGP1Q8IWZ8 645 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 KLHL7Q8IXQ5 586 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 GJD3Q8N144 294 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 MNS1Q8NEH6 495 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 EXOC4Q96A65 974 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 ACDQ96AP0 544 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 CCDC114Q96M63 670 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 NECAB3Q96P71 396 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 CIPCQ9C0C6 399 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 DDX47Q9H0S4 455 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 C10orf88Q9H8K7 445 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 L2HGDHQ9H9P8 463 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 CA14Q9ULX7 337 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 ZNF148Q9UQR1 794 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 MYLKQ15746 1914 aa12.81□□□□□ -0.36
TRAPPC12-217ENST00000473348 CFAP69A5D8W1 941 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 TBC1D3BA6NDS4 549 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 PRRT4C9JH25 899 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 KCNK1O00180 336 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 KCNN4O15554 427 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 ITGAVP06756 1048 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 RBL1P28749 1068 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 CHRNA3P32297 505 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 COILP38432 576 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 CTSOP43234 321 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 KCNJ1P48048 391 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 FNTAP49354 379 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 STK19P49842 368 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 GALK1P51570 392 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 GEMIN4P57678 1058 aaKnown RBP12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 SULT2A1Q06520 285 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 PON2Q15165 354 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 RETSATQ6NUM9 610 aa12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 CCDC137Q6PK04 289 aaKnown RBP12.8□□□□□ -0.36
TRAPPC12-217ENST00000473348 LINGO4Q6UY18 593 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms