RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 IL1BP01584 269 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 C5AR1P21730 350 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 FANCCQ00597 558 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 MANEALQ5VSG8 457 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 SFMBT2Q5VUG0 894 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 DSG4Q86SJ6 1040 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 NTAN1Q96AB6 310 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 VCPIP1Q96JH7 1222 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 MCEEQ96PE7 176 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 ZDHHC5Q9C0B5 715 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 NEUROG2Q9H2A3 272 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 TAS2R14Q9NYV8 317 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 ASCC3Q8N3C0 2202 aaKnown RBP23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 CCP110O43303 1012 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 FSBPO95073 299 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 SRCP12931 536 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 RRM1P23921 792 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 PRKCIP41743 596 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 ZNF143P52747 638 aaPredicted RBP23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 GRIK2Q13002 908 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 FIGNQ5HY92 759 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 PPP1R15BQ5SWA1 713 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 E4F1Q66K89 784 aaPredicted RBP23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 PSAPL1Q6NUJ1 521 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 Q6ZVU0 165 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 HDDC3Q8N4P3 179 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 AADATQ8N5Z0 425 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 CCDC185Q8N715 623 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 ATP11CQ8NB49 1132 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 OR7D4Q8NG98 312 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 C1orf216Q8TAB5 229 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 BIRC7Q96CA5 298 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 HAUS4Q9H6D7 363 aa23.1■■□□□ 1.29
PTP4A1-203ENST00000473334 LRRC72A6NJI9 287 aa23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 GOLGA6L19H0YKK7 550 aa23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 ALOX15BO15296 676 aa23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 OPHN1O60890 802 aa23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 MT-CO1P00395 513 aa23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 GOT1P17174 413 aa23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 CSRP1P21291 193 aaKnown RBP23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 NOVA1P51513 510 aaKnown RBP23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 GALCP54803 685 aa23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 RPL7AP62424 266 aaKnown RBP23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 ZSCAN23Q3MJ62 389 aa23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 KIAA0895LQ68EN5 471 aa23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 DCUN1D2Q6PH85 259 aa23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 DRC7Q8IY82 874 aa23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 OR2I1PQ8NGU4 316 aa23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 RETREG1Q9H6L5 497 aa23.09■■□□□ 1.29
PTP4A1-203ENST00000473334 FAM47DPA6NHR8 397 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 TMCO5BA8MYB1 307 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 PLEKP08567 350 aaPredicted RBP23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 RHOQP17081 205 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 DESP17661 470 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 CLCN6P51797 869 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 GNA12Q03113 381 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 KLHL30Q0D2K2 578 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 SCAPQ12770 1279 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 FAM46CQ5VWP2 391 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 RWDD4Q6NW29 188 aaKnown RBP23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 NCEH1Q6PIU2 408 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 ZNF571Q7Z3V5 609 aaPredicted RBP23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 SLFN11Q7Z7L1 901 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 OR2T34Q8NGX1 318 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 TBC1D31Q96DN5 1066 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 CCDC114Q96M63 670 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 CNPY3Q9BT09 278 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 ATP13A1Q9HD20 1204 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 OSGEPQ9NPF4 335 aa23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 DNAAF2Q9NVR5 837 aaKnown RBP23.08■■□□□ 1.29
PTP4A1-203ENST00000473334 CHD5Q8TDI0 1954 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 UPK3BL1B0FP48 263 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 UPK3BL2E5RIL1 263 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 C1QTNF3-AMACRE9PGA6 284 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 FAM72CH0Y354 149 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 MCF2LO15068 1137 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 BNIP3LO60238 219 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 LRIG2O94898 1065 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 IGHV4-34P06331 123 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 GLDCP23378 1020 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 CD27P26842 260 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 DRD3P35462 400 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 MAPKAPK2P49137 400 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 AFF3P51826 1226 aaKnown RBP23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 UBASH3AP57075 661 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 SEMA3BQ13214 749 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 SKOR2Q2VWA4 1001 aaPredicted RBP23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 N4BP2L1Q5TBK1 243 aaPredicted RBP23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 FAM72AQ5TYM5 149 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 FAM72DQ6L9T8 149 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 NLRP14Q86W24 1093 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 FAM72BQ86X60 149 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 SPON2Q9BUD6 331 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 MAGEB5Q9BZ81 275 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 TM9SF3Q9HD45 589 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 PARVAQ9NVD7 372 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 TMEM248Q9NWD8 314 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 NEU3Q9UQ49 428 aa23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 FARP1Q9Y4F1 1045 aaPredicted RBP23.07■■□□□ 1.28
PTP4A1-203ENST00000473334 SLCO1B1Q9Y6L6 691 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms