RNA–Protein interactions for RNA: ENST00000473312.5

AGAP3-211, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 1 (best) BASIC

Gene AGAP3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-211	ENST00000473312	IL1RAPL1	Q9NZN1	696 aa		27.57	■■■□□ 2
AGAP3-211	ENST00000473312	HS3ST4	Q9Y661	456 aa		27.57	■■■□□ 2
AGAP3-211	ENST00000473312	PLXNA3	P51805	1871 aa		27.56	■■■□□ 2
AGAP3-211	ENST00000473312	CCDC195	A0A1B0GUA6	201 aa		27.56	■■■□□ 2
AGAP3-211	ENST00000473312		E9PAM4	449 aa		27.56	■■■□□ 2
AGAP3-211	ENST00000473312	PROC	P04070	461 aa		27.56	■■■□□ 2
AGAP3-211	ENST00000473312	TUB	P50607	506 aa		27.56	■■■□□ 2
AGAP3-211	ENST00000473312	MLLT6	P55198	1093 aa	Predicted RBP	27.56	■■■□□ 2
AGAP3-211	ENST00000473312	KCNMB4	Q86W47	210 aa		27.56	■■■□□ 2
AGAP3-211	ENST00000473312	DCLK2	Q8N568	766 aa		27.56	■■■□□ 2
AGAP3-211	ENST00000473312	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	27.56	■■■□□ 2	9e-7	■■□□□ 12.2
AGAP3-211	ENST00000473312	PXYLP1	Q8TE99	480 aa		27.56	■■■□□ 2
AGAP3-211	ENST00000473312	SLC39A13	Q96H72	371 aa		27.56	■■■□□ 2
AGAP3-211	ENST00000473312	MCMBP	Q9BTE3	642 aa		27.56	■■■□□ 2
AGAP3-211	ENST00000473312	SNX15	Q9NRS6	342 aa		27.56	■■■□□ 2
AGAP3-211	ENST00000473312	IL37	Q9NZH6	218 aa		27.56	■■■□□ 2
AGAP3-211	ENST00000473312	PCDHB5	Q9Y5E4	795 aa		27.56	■■■□□ 2
AGAP3-211	ENST00000473312	C16orf46	Q6P387	395 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	USP33	Q8TEY7	942 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	TBL1Y	Q9BQ87	522 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	APOL2	Q9BQE5	337 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	ELAC1	Q9H777	363 aa	Known RBP	27.55	■■■□□ 2
AGAP3-211	ENST00000473312	OSER1	Q9NX31	292 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	NUP205	Q92621	2012 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	SHROOM3	Q8TF72	1996 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	MYO16	Q9Y6X6	1858 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	TIMM44	O43615	452 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	TADA2A	O75478	443 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	PRKCG	P05129	697 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	MPO	P05164	745 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	FGF3	P11487	239 aa	Predicted RBP	27.55	■■■□□ 2
AGAP3-211	ENST00000473312	GEM	P55040	296 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	CCDC153	Q494R4	210 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	VARS2	Q5ST30	1063 aa	Known RBP	27.55	■■■□□ 2
AGAP3-211	ENST00000473312	ARID3B	Q8IVW6	561 aa	Predicted RBP	27.55	■■■□□ 2
AGAP3-211	ENST00000473312	PTCD3	Q96EY7	689 aa	Known RBP	27.55	■■■□□ 2
AGAP3-211	ENST00000473312	PGLYRP2	Q96PD5	576 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	WWP1	Q9H0M0	922 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	CHRAC1	Q9NRG0	131 aa		27.55	■■■□□ 2
AGAP3-211	ENST00000473312	PRG3	Q9Y2Y8	225 aa	Predicted RBP	27.55	■■■□□ 2
AGAP3-211	ENST00000473312	HBS1L	Q9Y450	684 aa	Known RBP	27.55	■■■□□ 2
AGAP3-211	ENST00000473312		A0A1W2PQ45	241 aa	Predicted RBP	27.54	■■■□□ 2
AGAP3-211	ENST00000473312		A0A1W2PQY0	241 aa		27.54	■■■□□ 2
AGAP3-211	ENST00000473312	HADHA	P40939	763 aa		27.54	■■■□□ 2
AGAP3-211	ENST00000473312	MRPL58	Q14197	206 aa	Known RBP	27.54	■■■□□ 2
AGAP3-211	ENST00000473312	PPP1R14C	Q8TAE6	165 aa		27.54	■■■□□ 2
AGAP3-211	ENST00000473312	NSL1	Q96IY1	281 aa		27.54	■■■□□ 2
AGAP3-211	ENST00000473312	CFHR5	Q9BXR6	569 aa		27.54	■■■□□ 2
AGAP3-211	ENST00000473312	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	27.54	■■■□□ 2	2e-6	■■■■□ 22
AGAP3-211	ENST00000473312	C20orf96	Q9NUD7	363 aa	Predicted RBP	27.54	■■■□□ 2
AGAP3-211	ENST00000473312	UBP1	Q9NZI7	540 aa		27.54	■■■□□ 2
AGAP3-211	ENST00000473312	DNAJB4	Q9UDY4	337 aa		27.54	■■■□□ 2
AGAP3-211	ENST00000473312	OR6C75	A6NL08	312 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	CDK7	P50613	346 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	MPP3	Q13368	585 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	PCLAF	Q15004	111 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	HSP90AA5P	Q58FG0	334 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	PCID2	Q5JVF3	399 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	PDPK2P	Q6A1A2	396 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	FSTL4	Q6MZW2	842 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	AGAP2	Q99490	1192 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	TBC1D10A	Q9BXI6	508 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	RPL26L1	Q9UNX3	145 aa	Known RBP	27.53	■■■□□ 2
AGAP3-211	ENST00000473312	SERPINE1	P05121	402 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	TPH1	P17752	444 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	GRK2	P25098	689 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	FATE1	Q969F0	183 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	C20orf27	Q9GZN8	174 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	STARD7	Q9NQZ5	370 aa		27.53	■■■□□ 2
AGAP3-211	ENST00000473312	FBXO6	Q9NRD1	293 aa	Predicted RBP	27.53	■■■□□ 2
AGAP3-211	ENST00000473312	FAM92A	A1XBS5	289 aa		27.52	■■■□□ 2
AGAP3-211	ENST00000473312	FCHO1	O14526	889 aa		27.52	■■■□□ 2
AGAP3-211	ENST00000473312	CCDC22	O60826	627 aa		27.52	■■■□□ 2
AGAP3-211	ENST00000473312	NMBR	P28336	390 aa		27.52	■■■□□ 2
AGAP3-211	ENST00000473312	RPL10A	P62906	217 aa	Known RBP	27.52	■■■□□ 2
AGAP3-211	ENST00000473312	DDR2	Q16832	855 aa		27.52	■■■□□ 2
AGAP3-211	ENST00000473312	ANO4	Q32M45	955 aa		27.52	■■■□□ 2
AGAP3-211	ENST00000473312	HSF5	Q4G112	596 aa	Predicted RBP	27.52	■■■□□ 2
AGAP3-211	ENST00000473312	PPM1J	Q5JR12	505 aa		27.52	■■■□□ 2
AGAP3-211	ENST00000473312	ARMC3	Q5W041	872 aa		27.52	■■■□□ 2
AGAP3-211	ENST00000473312	PKN3	Q6P5Z2	889 aa		27.52	■■■□□ 2
AGAP3-211	ENST00000473312	C14orf80	Q86SX3	495 aa		27.52	■■■□□ 2
AGAP3-211	ENST00000473312	PTCD2	Q8WV60	388 aa	Known RBP	27.52	■■■□□ 2
AGAP3-211	ENST00000473312	ARL8B	Q9NVJ2	186 aa		27.52	■■■□□ 2
AGAP3-211	ENST00000473312	TMEM216	Q9P0N5	145 aa		27.52	■■■□□ 2
AGAP3-211	ENST00000473312	NUDT5	Q9UKK9	219 aa		27.52	■■■□□ 2
AGAP3-211	ENST00000473312	AOC2	O75106	756 aa		27.51	■■■□□ 2
AGAP3-211	ENST00000473312	GPR15	P49685	360 aa		27.51	■■■□□ 2
AGAP3-211	ENST00000473312	IRX4	P78413	519 aa		27.51	■■■□□ 2
AGAP3-211	ENST00000473312	CTXN3	Q4LDR2	81 aa		27.51	■■■□□ 2
AGAP3-211	ENST00000473312	LHX8	Q68G74	356 aa		27.51	■■■□□ 2
AGAP3-211	ENST00000473312	SPATA22	Q8NHS9	363 aa		27.51	■■■□□ 2
AGAP3-211	ENST00000473312	RAET1E	Q8TD07	263 aa		27.51	■■■□□ 2
AGAP3-211	ENST00000473312	ZNF395	Q9H8N7	513 aa	Predicted RBP	27.51	■■■□□ 2
AGAP3-211	ENST00000473312	MRM3	Q9HC36	420 aa	Known RBP	27.51	■■■□□ 2
AGAP3-211	ENST00000473312	ENTPD7	Q9NQZ7	604 aa		27.51	■■■□□ 2
AGAP3-211	ENST00000473312	NDFIP2	Q9NV92	336 aa		27.51	■■■□□ 2
AGAP3-211	ENST00000473312	DONSON	Q9NYP3	566 aa		27.51	■■■□□ 2
AGAP3-211	ENST00000473312	COPG2	Q9UBF2	871 aa		27.51	■■■□□ 2
AGAP3-211	ENST00000473312	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	27.51	■■□□□ 1.99

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