RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 FAM183BPQ6ZVS7 135 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 LPCAT2Q7L5N7 544 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 XYLT1Q86Y38 959 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 CPNE8Q86YQ8 564 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 SYT12Q8IV01 421 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 TMEFF1Q8IYR6 380 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 THEM5Q8N1Q8 247 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 WDTC1Q8N5D0 677 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 FRMD1Q8N878 549 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 MAB21L3Q8N8X9 362 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 ANKRD52Q8NB46 1076 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 C3orf20Q8ND61 904 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 OR2I1PQ8NGU4 316 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 MYCBPAPQ8TBZ2 947 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 MDM1Q8TC05 714 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 RLN3Q8WXF3 142 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 ADAMTS14Q8WXS8 1223 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 CD101Q93033 1021 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 C18orf8Q96DM3 657 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 SMARCD1Q96GM5 515 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 CRELD1Q96HD1 420 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 LRIG1Q96JA1 1093 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 CAPZA3Q96KX2 299 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 FRMD6Q96NE9 622 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 GCNAQ96QF7 691 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 SEPT5Q99719 369 aaPredicted RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 HNRNPABQ99729 332 aaKnown RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 SELENOOQ9BVL4 669 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 TLR10Q9BXR5 811 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 B3GNT5Q9BYG0 378 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 ZCCHC2Q9C0B9 1178 aaKnown RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 MIS12Q9H081 205 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 TSPYL1Q9H0U9 437 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 CCDC86Q9H6F5 360 aaKnown RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 KIF9Q9HAQ2 790 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 CAPN10Q9HC96 672 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 MRPL47Q9HD33 250 aaKnown RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 PARVAQ9NVD7 372 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 PILRBQ9UKJ0 227 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 AMFRQ9UKV5 643 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 SNX12Q9UMY4 172 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 SPTAN1Q13813 2472 aaKnown RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 ADAMTS9Q9P2N4 1935 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 DOCK4Q8N1I0 1966 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 PLXND1Q9Y4D7 1925 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 TCRBV5S1A1TA0A578 114 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 EFSO43281 561 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 SRGAP2O75044 1071 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 GJB3O75712 270 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 PROSCO94903 275 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 TCP1P17987 556 aaKnown RBP6.61□□□□□ -1.35
HDAC1-205ENST00000472928 COMTP21964 271 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 CXCR5P32302 372 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 MAN1A1P33908 653 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 GJC1P36383 396 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 AVPR1AP37288 418 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 ACADSBP45954 432 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 GABRB2P47870 512 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 MARCKSL1P49006 195 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 MAP3K7CLP57077 242 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 SNX16P57768 344 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 CKAP4Q07065 602 aaKnown RBP6.61□□□□□ -1.35
HDAC1-205ENST00000472928 ADIGQ0VDE8 80 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 VEPH1Q14D04 833 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 RPS6KA1Q15418 735 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 MAPRE1Q15691 268 aaKnown RBP6.61□□□□□ -1.35
HDAC1-205ENST00000472928 ZNF77Q15935 545 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 CRY1Q16526 586 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 WHAMMP3Q1A5X7 153 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 SLC39A12Q504Y0 691 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 PAPD7Q5XG87 772 aaKnown RBP6.61□□□□□ -1.35
HDAC1-205ENST00000472928 LYSMD4Q5XG99 296 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 TXNDC8Q6A555 127 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 PMF1Q6P1K2 205 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 DCUN1D2Q6PH85 259 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 C4orf50Q6ZRC1 276 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 CLEC20AQ6ZU45 233 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 SLFN11Q7Z7L1 901 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 NT5DC3Q86UY8 548 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 LRRTM3Q86VH5 581 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 MON1AQ86VX9 555 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 SPATA2LQ8IUW3 424 aaPredicted RBP6.61□□□□□ -1.35
HDAC1-205ENST00000472928 SFTPA1Q8IWL2 248 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 SIX6OS1Q8N1H7 587 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 CPA6Q8N4T0 437 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 MINDY1Q8N5J2 469 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 CCDC33Q8N5R6 958 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 PNPLA1Q8N8W4 532 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 STKLD1Q8NE28 680 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 MNS1Q8NEH6 495 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 OSCP1Q8WVF1 389 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 CCDC74AQ96AQ1 378 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 PCED1BQ96HM7 432 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 PIWIL1Q96J94 861 aaKnown RBP6.61□□□□□ -1.35
HDAC1-205ENST00000472928 CAMK1GQ96NX5 476 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 OSBPL9Q96SU4 736 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 PKMYT1Q99640 499 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 ACBD6Q9BR61 282 aa6.61□□□□□ -1.35
HDAC1-205ENST00000472928 GTPBP2Q9BX10 602 aaKnown RBP6.61□□□□□ -1.35
HDAC1-205ENST00000472928 DUSP16Q9BY84 665 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms