RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 IL27RAQ6UWB1 636 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 LRRC31Q6UY01 552 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 TFAP2DQ7Z6R9 452 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 ADAT2Q7Z6V5 191 aaKnown RBP16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 FAM131BQ86XD5 332 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 SLC30A5Q8TAD4 765 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 SETD7Q8WTS6 366 aaKnown RBP16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 FRS2Q8WU20 508 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 OR8D1Q8WZ84 308 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 C11orf70Q9BRQ4 267 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 TM7SF3Q9NS93 570 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 MPP6Q9NZW5 540 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 TMEM59LQ9UK28 342 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 FZD4Q9ULV1 537 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 TBC1D30Q9Y2I9 924 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 OR51B4Q9Y5P0 310 aa16.14■□□□□ 0.17
CCDC88B-205ENST00000472524 LRRC72A6NJI9 287 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 E9PAM4 449 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 SNAP91O60641 907 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 SRGAP2O75044 1071 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 GJB6O95452 261 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 GOT1P17174 413 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 METAP1P53582 386 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 DLG2Q15700 870 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 CDO1Q16878 200 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 KIF19Q2TAC6 998 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 CCNI2Q6ZMN8 369 aaPredicted RBP16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 Q6ZVU0 165 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 GLRX5Q86SX6 157 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 PROSER1Q86XN7 944 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 ZNF683Q8IZ20 524 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 AOPEPQ8N6M6 819 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 OR2T34Q8NGX1 318 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 OR14C36Q8NHC7 312 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 SLC6A18Q96N87 628 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 ORAI3Q9BRQ5 295 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 ADAMTS1Q9UHI8 967 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 ANKRD6Q9Y2G4 727 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 DAAM1Q9Y4D1 1078 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 SNX11Q9Y5W9 270 aa16.13■□□□□ 0.17
CCDC88B-205ENST00000472524 TDRD6O60522 2096 aaKnown RBP16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 PLK4O00444 970 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 ATP9BO43861 1147 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 MMP8P22894 467 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 DRD3P35462 400 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 GRIA4P48058 902 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 ADPRHP54922 357 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 KRT83P78385 493 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 TYRO3Q06418 890 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 NCAPHQ15003 741 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 C15orf59Q2T9L4 293 aaPredicted RBP16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 POM121L1PQ3SYA9 428 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 RAB6CQ53S08 254 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 TRIM72Q6ZMU5 477 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 DSG4Q86SJ6 1040 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 SH2D3CQ8N5H7 860 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 RXFP2Q8WXD0 754 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 C1orf74Q96LT6 269 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 PSMB7Q99436 277 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 RAB6CQ9H0N0 254 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 OSGEPQ9NPF4 335 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 SEPT11Q9NVA2 429 aaKnown RBP16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 TOR4AQ9NXH8 423 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 VPS51Q9UID3 782 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 SARDHQ9UL12 918 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 APOBEC2Q9Y235 224 aaKnown RBP16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 PTPRBP23467 1997 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 TRPM6Q9BX84 2022 aa16.12■□□□□ 0.17
CCDC88B-205ENST00000472524 A0A0D9SEW6 157 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 A0A1W2PPC4 97 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 DRGXA6NNA5 263 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 KCNK3O14649 394 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 MT-CO1P00395 513 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 ZNF883P0CG24 379 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 SRCP12931 536 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 OR1E1P30953 314 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 SDC4P31431 198 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 VASPP50552 380 aaPredicted RBP16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 C6orf118Q5T5N4 469 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 ARCQ7LC44 396 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 BNIPLQ7Z465 357 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 SETD3Q86TU7 594 aaPredicted RBP16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 ATP11CQ8NB49 1132 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 OR7D4Q8NG98 312 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 JOSD2Q8TAC2 188 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 BAHD1Q8TBE0 780 aaPredicted RBP16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 HAPLN3Q96S86 360 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 PCDHB18PQ96TA0 734 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 C2orf49Q9BVC5 232 aaPredicted RBP16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 HSD3B7Q9H2F3 369 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 EBF2Q9HAK2 575 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 TMEM51Q9NW97 253 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 TMEM63CQ9P1W3 806 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 BTBD3Q9Y2F9 522 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 ITPR1Q14643 2758 aa16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 GOLGA4Q13439 2230 aaKnown RBP16.11■□□□□ 0.17
CCDC88B-205ENST00000472524 NBEAQ8NFP9 2946 aa16.1■□□□□ 0.17
CCDC88B-205ENST00000472524 IGLV3-10A0A075B6K4 115 aa16.1■□□□□ 0.17
CCDC88B-205ENST00000472524 TBC1D3DA0A087WVF3 549 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms