RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 SEMA4AQ9H3S1 761 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 PCDH18Q9HCL0 1135 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 CD248Q9HCU0 757 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 NDFIP2Q9NV92 336 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 POLR3BQ9NW08 1133 aaPredicted RBP15.47■□□□□ 0.07
SNX13-205ENST00000471744 DDX56Q9NY93 547 aaKnown RBP15.47■□□□□ 0.07
SNX13-205ENST00000471744 VPS51Q9UID3 782 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 RCCD1A6NED2 376 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 ARHGAP42A6NI28 874 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 ZNF487B1APH4 448 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 CBX4O00257 560 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 PSTPIP1O43586 416 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 ATP9BO43861 1147 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 BUB1BO60566 1050 aaPredicted RBP15.46■□□□□ 0.07
SNX13-205ENST00000471744 COMTP21964 271 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 SERPINB6P35237 376 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 GJC1P36383 396 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 CTSOP43234 321 aaPredicted RBP15.46■□□□□ 0.07
SNX13-205ENST00000471744 FNTBP49356 437 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 TAS2R40P59535 323 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 ODF2Q5BJF6 829 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 HEATR6Q6AI08 1181 aaKnown RBP15.46■□□□□ 0.07
SNX13-205ENST00000471744 KIAA1211LQ6NV74 962 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 TMCO3Q6UWJ1 677 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 DAAM2Q86T65 1068 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 SH2D3CQ8N5H7 860 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 MDGA1Q8NFP4 955 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 OR2T3Q8NH03 318 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 TPCN2Q8NHX9 752 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 HMGB4Q8WW32 186 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 TSC1Q92574 1164 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 RPL10LQ96L21 214 aaKnown RBP15.46■□□□□ 0.07
SNX13-205ENST00000471744 CSPG4P5Q96PW8 444 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 DESI2Q9BSY9 194 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 LACRTQ9GZZ8 138 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 PRDM16Q9HAZ2 1276 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 RAD54BQ9Y620 910 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 ADGRG1Q9Y653 693 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 ALG6Q9Y672 507 aa15.46■□□□□ 0.07
SNX13-205ENST00000471744 RASA4BC9J798 803 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 RASA4O43374 803 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 KDELR3O43731 214 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 KRT86O43790 486 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 SNAP91O60641 907 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 RNASEH1O60930 286 aaKnown RBP15.45■□□□□ 0.06
SNX13-205ENST00000471744 LILRB5O75023 590 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 ZMPSTE24O75844 475 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 HLA-EP13747 358 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 GABRG2P18507 467 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 STK19P49842 368 aaPredicted RBP15.45■□□□□ 0.06
SNX13-205ENST00000471744 ARSEP51690 589 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 USP39Q53GS9 565 aaKnown RBP15.45■□□□□ 0.06
SNX13-205ENST00000471744 C11orf74Q86VG3 221 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 ZNF354CQ86Y25 554 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 PGBD3Q8N328 593 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 ATP11CQ8NB49 1132 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 CASKIN2Q8WXE0 1202 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 CCDC114Q96M63 670 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 CALN1Q9BXU9 219 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 CEP44Q9C0F1 390 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 LRRC19Q9H756 370 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 PRSS16Q9NQE7 514 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 SLCO3A1Q9UIG8 710 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 TFR2Q9UP52 801 aa15.45■□□□□ 0.06
SNX13-205ENST00000471744 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNX13-205ENST00000471744 FARP1Q9Y4F1 1045 aaPredicted RBP15.45■□□□□ 0.06
SNX13-205ENST00000471744 TTC34A8MYJ7 566 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 DCLK1O15075 740 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 BUB1O43683 1085 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 ZNF217O75362 1048 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 PTMAP06454 111 aaKnown RBP15.44■□□□□ 0.06
SNX13-205ENST00000471744 CCDC175P0C221 793 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 C7P10643 843 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 NDUFV2P19404 249 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 KDELR1P24390 212 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 ACVRL1P37023 503 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 NBL1P41271 181 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 SERPINH1P50454 418 aaKnown RBP15.44■□□□□ 0.06
SNX13-205ENST00000471744 CCZ1BP86790 482 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 CCZ1P86791 482 aaPredicted RBP15.44■□□□□ 0.06
SNX13-205ENST00000471744 ZBTB16Q05516 673 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 SFSWAPQ12872 951 aaKnown RBP15.44■□□□□ 0.06
SNX13-205ENST00000471744 SERINC3Q13530 473 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 DPYSL3Q14195 570 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 ELAVL3Q14576 367 aaKnown RBP15.44■□□□□ 0.06
SNX13-205ENST00000471744 DLG2Q15700 870 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 ACCSLQ4AC99 568 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 DSG4Q86SJ6 1040 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 CPNE8Q86YQ8 564 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 TMPRSS6Q8IU80 811 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 SYCE1Q8N0S2 351 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 RNF10Q8N5U6 811 aaKnown RBP15.44■□□□□ 0.06
SNX13-205ENST00000471744 KIAA1524Q8TCG1 905 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 FRS2Q8WU20 508 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 UBE2Q2Q8WVN8 375 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 GAB3Q8WWW8 586 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 PRCCQ92733 491 aaPredicted RBP15.44■□□□□ 0.06
SNX13-205ENST00000471744 SPACA7Q96KW9 195 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 MRGPRX1Q96LB2 322 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 NOL6Q9H6R4 1146 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms