RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 F5H5T6 163 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 XPO1O14980 1071 aaKnown RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 POLR2DO15514 142 aaKnown RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 SLC7A4O43246 635 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 CALUO43852 315 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 CD2BP2O95400 341 aaKnown RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 PAK4O96013 591 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 APOEP02649 317 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 LTFP02788 710 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 ITGB2P05107 769 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 GIMD1P0DJR0 217 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 ITGB6P18564 788 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 ITIH1P19827 911 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 TACR2P21452 398 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 NOS2P35228 1153 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 UGT1A5P35504 534 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 RAD23BP54727 409 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 ADKP55263 362 aaKnown RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 DAOAP59103 153 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 LRMPQ12912 555 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 CUL4BQ13620 913 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 PDE1CQ14123 709 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 ARID5BQ14865 1188 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 CLCA4Q14CN2 919 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 RABEP1Q15276 862 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 DLG2Q15700 870 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 PRRT3Q5FWE3 981 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 MS4A13Q5J8X5 152 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 RAB41Q5JT25 222 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 FAXCQ5TGI0 409 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 FOXD4L5Q5VV16 416 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 PM20D1Q6GTS8 502 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 ESRP1Q6NXG1 681 aaKnown RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 GCNT7Q6ZNI0 430 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 B3GNT8Q7Z7M8 397 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 HORMAD1Q86X24 394 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 ZFAND4Q86XD8 727 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 C12orf56Q8IXR9 622 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 RBFAQ8N0V3 343 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 SLC22A18ASQ8N1D0 253 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 Q8N9G6 341 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 ATP11CQ8NB49 1132 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 TPCN2Q8NHX9 752 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 FOXD4L4Q8WXT5 416 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 GFM1Q96RP9 751 aaKnown RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 USP28Q96RU2 1077 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 C7orf25Q9BPX7 421 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 ZNF71Q9NQZ8 489 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 KBTBD4Q9NVX7 518 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 NCKIPSDQ9NZQ3 722 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 XPO7Q9UIA9 1087 aaKnown RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 STOML2Q9UJZ1 356 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 MAPK8IP1Q9UQF2 711 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 MAN2B2Q9Y2E5 1009 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 PCDHGA4Q9Y5G9 962 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 TEX15Q9BXT5 2789 aa7.07□□□□□ -1.28
HDAC1-204ENST00000471488 DOCK9Q9BZ29 2069 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 PRAMEF33A0A0G2JMD5 474 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 EME2A4GXA9 379 aaPredicted RBP7.06□□□□□ -1.28
HDAC1-204ENST00000471488 POM121BA6NF01 834 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 M0QYV0 167 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 NEMP1O14524 444 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 IKBKBO14920 756 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 PRAMEF10O60809 474 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 TCEA3O75764 348 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 CSF2P04141 144 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 RPLP0P05388 317 aaKnown RBP7.06□□□□□ -1.28
HDAC1-204ENST00000471488 ANXA6P08133 673 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 LIPCP11150 499 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 NR2F2P24468 414 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 PPM1FP49593 454 aaPredicted RBP7.06□□□□□ -1.28
HDAC1-204ENST00000471488 DNA2P51530 1060 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 THOP1P52888 689 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 TAS2R38P59533 333 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 CLDN10P78369 228 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 SULT2A1Q06520 285 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 PPP3CAQ08209 521 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 CCDC15Q0P6D6 951 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 SGCGQ13326 291 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 FZD2Q14332 565 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 SLC39A14Q15043 492 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 ZNF284Q2VY69 593 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 TCERG1LQ5VWI1 586 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 ARHGAP17Q68EM7 881 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 XKR5Q6UX68 686 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 BHLHA9Q7RTU4 235 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 RD3Q7Z3Z2 195 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 CLEC14AQ86T13 490 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 PARGQ86W56 976 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 FAM186BQ8IYM0 893 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 CEP57L1Q8IYX8 460 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 SDR16C5Q8N3Y7 309 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 FAM26EQ8N5C1 309 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 KDM1BQ8NB78 822 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 TMEM145Q8NBT3 493 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 ZNF564Q8TBZ8 553 aaPredicted RBP7.06□□□□□ -1.28
HDAC1-204ENST00000471488 TMC2Q8TDI7 906 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 GRAMD1AQ96CP6 724 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 LMLNQ96KR4 655 aa7.06□□□□□ -1.28
HDAC1-204ENST00000471488 CCDC114Q96M63 670 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms