RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 TXNDC8Q6A555 127 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 RWDD4Q6NW29 188 aaKnown RBP17.9■□□□□ 0.46
HSPG2-208ENST00000471322 ATP6V0D2Q8N8Y2 350 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 ATP11CQ8NB49 1132 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 UHMK1Q8TAS1 419 aaKnown RBP17.9■□□□□ 0.46
HSPG2-208ENST00000471322 ZSCAN18Q8TBC5 510 aaPredicted RBP17.9■□□□□ 0.46
HSPG2-208ENST00000471322 TLCD1Q96CP7 247 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 GCNAQ96QF7 691 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 SMG9Q9H0W8 520 aaKnown RBP17.9■□□□□ 0.46
HSPG2-208ENST00000471322 GDE1Q9NZC3 331 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 TCRBV7S3A2A0A539 114 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 E7EVH7 732 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 CDC25CP30307 473 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 VIPR2P41587 438 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 EFEMP1Q12805 493 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 SEMA5AQ13591 1074 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 PARP6Q2NL67 630 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 DNAJC21Q5F1R6 531 aaKnown RBP17.9■□□□□ 0.46
HSPG2-208ENST00000471322 C10orf120Q5SQS8 335 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 FNBP1LQ5T0N5 605 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 MANEALQ5VSG8 457 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 RIBC1Q8N443 379 aaPredicted RBP17.9■□□□□ 0.46
HSPG2-208ENST00000471322 TAB3Q8N5C8 712 aaPredicted RBP17.9■□□□□ 0.46
HSPG2-208ENST00000471322 SH2D3CQ8N5H7 860 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 MAB21L3Q8N8X9 362 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 HDAC11Q96DB2 347 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 VAT1Q99536 393 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 EPHX3Q9H6B9 360 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 TRPC7Q9HCX4 862 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 MARCH2Q9P0N8 246 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 NOVA2Q9UNW9 492 aaKnown RBP17.9■□□□□ 0.46
HSPG2-208ENST00000471322 RNF103O00237 685 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 NARSO43776 548 aaKnown RBP17.89■□□□□ 0.45
HSPG2-208ENST00000471322 APRTP07741 180 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 VAV1P15498 845 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 RING1Q06587 406 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 HTR4Q13639 388 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 BBS9Q3SYG4 887 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 CCDC38Q502W7 563 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 SNX30Q5VWJ9 437 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 TANGO2Q6ICL3 276 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 LRRC31Q6UY01 552 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 LRRC49Q8IUZ0 686 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 PALM2Q8IXS6 379 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 TTC16Q8NEE8 873 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 LRRC39Q96DD0 335 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 BTN2A3PQ96KV6 586 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 MYRFLQ96LU7 910 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 ASB16Q96NS5 453 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 LRRC4CQ9HCJ2 640 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 NUDT5Q9UKK9 219 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 TRHDEQ9UKU6 1024 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 SNX10Q9Y5X0 201 aa17.89■□□□□ 0.45
HSPG2-208ENST00000471322 C2orf78A6NCI8 922 aa17.88■□□□□ 0.45
HSPG2-208ENST00000471322 WASH4PA8MWX3 477 aa17.88■□□□□ 0.45
HSPG2-208ENST00000471322 CDH16O75309 829 aa17.88■□□□□ 0.45
HSPG2-208ENST00000471322 SPAG6O75602 509 aa17.88■□□□□ 0.45
HSPG2-208ENST00000471322 GARSP41250 739 aaKnown RBP17.88■□□□□ 0.45
HSPG2-208ENST00000471322 TUBP50607 506 aa17.88■□□□□ 0.45
HSPG2-208ENST00000471322 MAGOHP61326 146 aaKnown RBP17.88■□□□□ 0.45
HSPG2-208ENST00000471322 AUHQ13825 339 aaKnown RBP17.88■□□□□ 0.45
HSPG2-208ENST00000471322 ARHGAP15Q53QZ3 475 aa17.88■□□□□ 0.45
HSPG2-208ENST00000471322 UBAP2Q5T6F2 1119 aaKnown RBP17.88■□□□□ 0.45
HSPG2-208ENST00000471322 SLC44A3Q8N4M1 653 aa17.88■□□□□ 0.45
HSPG2-208ENST00000471322 EPS8L3Q8TE67 593 aaKnown RBP17.88■□□□□ 0.45
HSPG2-208ENST00000471322 TRMT2BQ96GJ1 504 aaKnown RBP17.88■□□□□ 0.45
HSPG2-208ENST00000471322 CYP2S1Q96SQ9 504 aa17.88■□□□□ 0.45
HSPG2-208ENST00000471322 SLC46A2Q9BY10 475 aa17.88■□□□□ 0.45
HSPG2-208ENST00000471322 PLA2G2FQ9BZM2 168 aa17.88■□□□□ 0.45
HSPG2-208ENST00000471322 VPS37BQ9H9H4 285 aa17.88■□□□□ 0.45
HSPG2-208ENST00000471322 XAB2Q9HCS7 855 aaKnown RBP17.88■□□□□ 0.45
HSPG2-208ENST00000471322 EIF2B3Q9NR50 452 aaKnown RBP17.88■□□□□ 0.45
HSPG2-208ENST00000471322 IGSF9Q9P2J2 1179 aa17.88■□□□□ 0.45
HSPG2-208ENST00000471322 UXTQ9UBK9 157 aaPredicted RBP17.88■□□□□ 0.45
HSPG2-208ENST00000471322 HBS1LQ9Y450 684 aaKnown RBP17.88■□□□□ 0.45
HSPG2-208ENST00000471322 HS3ST4Q9Y661 456 aa17.88■□□□□ 0.45
HSPG2-208ENST00000471322 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.88■□□□□ 0.45
HSPG2-208ENST00000471322 ZFP37Q9Y6Q3 630 aaPredicted RBP17.88■□□□□ 0.45
HSPG2-208ENST00000471322 ANHXE9PGG2 379 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 DCXO43602 365 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 METTL18O95568 372 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 FGF19O95750 216 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 FCARP24071 287 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 PPP3CCP48454 512 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 LMAN1P49257 510 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 WASHC5Q12768 1159 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 TNFAIP8L3Q5GJ75 292 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 TAOK1Q7L7X3 1001 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 ARID3BQ8IVW6 561 aaPredicted RBP17.87■□□□□ 0.45
HSPG2-208ENST00000471322 CCDC13Q8IYE1 715 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 CCDC33Q8N5R6 958 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 MRPS31Q92665 395 aaKnown RBP17.87■□□□□ 0.45
HSPG2-208ENST00000471322 SMARCD2Q92925 531 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 TSGA13Q96PP4 275 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 SLC22A12Q96S37 553 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 CNOT10Q9H9A5 744 aaKnown RBP17.87■□□□□ 0.45
HSPG2-208ENST00000471322 PPARGC1AQ9UBK2 798 aaKnown RBP17.87■□□□□ 0.45
HSPG2-208ENST00000471322 FETUBQ9UGM5 382 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 GREB1Q4ZG55 1949 aa17.87■□□□□ 0.45
HSPG2-208ENST00000471322 SMIM23A6NLE4 172 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms