RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 KRT222Q8N1A0 295 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 TTC9BQ8N6N2 239 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 RTL3Q8N8U3 475 aaKnown RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 MCUQ8NE86 351 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 DEPDC1BQ8WUY9 529 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 EXOC4Q96A65 974 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 ZNF512Q96ME7 567 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 GCNAQ96QF7 691 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 RUFY1Q96T51 708 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 TMEM121Q9BTD3 319 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 TMEM109Q9BVC6 243 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 TRMT61BQ9BVS5 477 aaKnown RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 RAB6CQ9H0N0 254 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 DPH5Q9H2P9 285 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 BRD9Q9H8M2 597 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 GPATCH2LQ9NWQ4 482 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 OSER1Q9NX31 292 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 STOML2Q9UJZ1 356 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 HPCAL4Q9UM19 191 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 SMG5Q9UPR3 1016 aaKnown RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 NEU3Q9UQ49 428 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 ZNF510Q9Y2H8 683 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 SLC27A5Q9Y2P5 690 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 FARP1Q9Y4F1 1045 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 ACACBO00763 2458 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 EPG5Q9HCE0 2579 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 F5P12259 2224 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 A0A0A0MRY4 1105 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 DRGXA6NNA5 263 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 TP73O15350 636 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 PAGE1O75459 146 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 TCEA3O75764 348 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 SEC24AO95486 1093 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 RHOP08100 348 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 MLNP12872 115 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 TPSB2P20231 275 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 ETFBP38117 255 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 HARS2P49590 506 aaKnown RBP9.38□□□□□ -0.91
PTPRE-207ENST00000471218 GPR15P49685 360 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 ITGA8P53708 1063 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 EPHA5P54756 1037 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 YBEYP58557 167 aaPredicted RBP9.38□□□□□ -0.91
PTPRE-207ENST00000471218 SARNPP82979 210 aaKnown RBP9.38□□□□□ -0.91
PTPRE-207ENST00000471218 GBE1Q04446 702 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 TNK2Q07912 1038 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 DHX9Q08211 1270 aaKnown RBP9.38□□□□□ -0.91
PTPRE-207ENST00000471218 GPS1Q13098 491 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 TPSAB1Q15661 275 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 PARP15Q460N3 678 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 IZUMO3Q5VZ72 239 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 AFMIDQ63HM1 303 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 ITPRIPL1Q6GPH6 555 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 LAIR1Q6GTX8 287 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 TIGD7Q6NT04 549 aaPredicted RBP9.38□□□□□ -0.91
PTPRE-207ENST00000471218 DNAJB7Q7Z6W7 309 aaPredicted RBP9.38□□□□□ -0.91
PTPRE-207ENST00000471218 DDX42Q86XP3 938 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPRE-207ENST00000471218 NPAS3Q8IXF0 933 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 KLHDC8BQ8IXV7 354 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 ZNF683Q8IZ20 524 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 UMODL1-AS1Q8N2C9 162 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 DCLK2Q8N568 766 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 FAM71DQ8N9W8 422 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 ITFG1Q8TB96 612 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 NETO1Q8TDF5 533 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 HTR3CQ8WXA8 447 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 SPATA13Q96N96 652 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 SH3GL2Q99962 352 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 RPP25Q9BUL9 199 aaKnown RBP9.38□□□□□ -0.91
PTPRE-207ENST00000471218 XAB2Q9HCS7 855 aaKnown RBP9.38□□□□□ -0.91
PTPRE-207ENST00000471218 PRMT8Q9NR22 394 aaPredicted RBP9.38□□□□□ -0.91
PTPRE-207ENST00000471218 TMEM248Q9NWD8 314 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 DNMT3BQ9UBC3 853 aaKnown RBP9.38□□□□□ -0.91
PTPRE-207ENST00000471218 FETUBQ9UGM5 382 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 HEY1Q9Y5J3 304 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 GPR179Q6PRD1 2367 aa9.38□□□□□ -0.91
PTPRE-207ENST00000471218 SYNJ2BP-COX16A0A087WUM0 186 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 GOLGA6CA6NDK9 693 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 GOLGA6L10A6NI86 522 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 E7ESA3 106 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 E9PAM4 449 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 I6L893 689 aaPredicted RBP9.37□□□□□ -0.91
PTPRE-207ENST00000471218 KCNN4O15554 427 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 PSMD3O43242 534 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 CREB3O43889 395 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 MFSD11O43934 449 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 IFNB1P01574 187 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 RETP07949 1114 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 GSTA2P09210 222 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 GOLGA6DP0CG33 693 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 PSMC3P17980 439 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 AMPD1P23109 780 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 CCNCP24863 283 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 RPL22P35268 128 aaKnown RBP9.37□□□□□ -0.91
PTPRE-207ENST00000471218 GARSP41250 739 aaKnown RBP9.37□□□□□ -0.91
PTPRE-207ENST00000471218 CXCL12P48061 93 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 IFNAR2P48551 515 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 PMS2P54278 862 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 ARL4CP56559 192 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 FAM193AP78312 1265 aa9.37□□□□□ -0.91
PTPRE-207ENST00000471218 IFI35P80217 286 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms