RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 RFWD3Q6PCD5 774 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 LCLAT1Q6UWP7 414 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 DHRS13Q6UX07 377 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 TXLNBQ8N3L3 684 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 HJURPQ8NCD3 748 aaPredicted RBP9.36□□□□□ -0.91
SF3A1-206ENST00000471037 SLC30A5Q8TAD4 765 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 SLC35F5Q8WV83 523 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 TFAP2BQ92481 460 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 SKA1Q96BD8 255 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 MRGPRX3Q96LB0 322 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 PRICKLE1Q96MT3 831 aaPredicted RBP9.36□□□□□ -0.91
SF3A1-206ENST00000471037 SLC6A18Q96N87 628 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 PDCL3Q9H2J4 239 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 MTG2Q9H4K7 406 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 EBF2Q9HAK2 575 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 SPTLC3Q9NUV7 552 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 SEPT11Q9NVA2 429 aaKnown RBP9.36□□□□□ -0.91
SF3A1-206ENST00000471037 FBXL12Q9NXK8 326 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 SERGEFQ9UGK8 458 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 INTS6Q9UL03 887 aaKnown RBP9.36□□□□□ -0.91
SF3A1-206ENST00000471037 FZD4Q9ULV1 537 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 TPX2Q9ULW0 747 aaKnown RBP9.36□□□□□ -0.91
SF3A1-206ENST00000471037 NENFQ9UMX5 172 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 ZKSCAN5Q9Y2L8 839 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 CABIN1Q9Y6J0 2220 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 GOLGA6L7A0A1B0GV03 622 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 TARSL2A2RTX5 802 aaKnown RBP9.35□□□□□ -0.91
SF3A1-206ENST00000471037 TYW5A2RUC4 315 aaKnown RBP9.35□□□□□ -0.91
SF3A1-206ENST00000471037 LRRC72A6NJI9 287 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 CCP110O43303 1012 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 RNASEH1O60930 286 aaKnown RBP9.35□□□□□ -0.91
SF3A1-206ENST00000471037 PLXNA2O75051 1894 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 GABBR2O75899 941 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 LTFP02788 710 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 WNT1P04628 370 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 CYP1A1P04798 512 aaPredicted RBP9.35□□□□□ -0.91
SF3A1-206ENST00000471037 CCDC175P0C221 793 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 LCP1P13796 627 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 CDH5P33151 784 aaPredicted RBP9.35□□□□□ -0.91
SF3A1-206ENST00000471037 HNF1BP35680 557 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 CSKP41240 450 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 ABCG1P45844 678 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 CCR5P51681 352 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 TBX4P57082 545 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 IL9RQ01113 521 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 NNTQ13423 1086 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 SHBQ15464 509 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 CST6Q15828 149 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 CLEC16AQ2KHT3 1053 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 NADSYN1Q6IA69 706 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 PMF1Q6P1K2 205 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 ALKBH5Q6P6C2 394 aaKnown RBP9.35□□□□□ -0.91
SF3A1-206ENST00000471037 NCEH1Q6PIU2 408 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 TMEM35BQ8NCS4 154 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 OR2T34Q8NGX1 318 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 UBA3Q8TBC4 463 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 SAP25Q8TEE9 199 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 NXPE2Q96DL1 559 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 DDX50Q9BQ39 737 aaKnown RBP9.35□□□□□ -0.91
SF3A1-206ENST00000471037 ADGRG1Q9Y653 693 aa9.35□□□□□ -0.91
SF3A1-206ENST00000471037 KNL1Q8NG31 2342 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 URB1O60287 2271 aaKnown RBP9.34□□□□□ -0.91
SF3A1-206ENST00000471037 EDDM13A0A1B0GTR0 161 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 A0A1W2PP55 124 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 A0A1W2PR77 199 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 M0QYV0 167 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 PLK4O00444 970 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 ENC1O14682 589 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 MID1O15344 667 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 ZSCAN12O43309 604 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 RTN2O75298 545 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 RFPL3O75679 317 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 RNASEH2AO75792 299 aaKnown RBP9.34□□□□□ -0.91
SF3A1-206ENST00000471037 FBXO21O94952 628 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 CALCAP01258 141 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 SRPRAP08240 638 aaKnown RBP9.34□□□□□ -0.91
SF3A1-206ENST00000471037 UNGP13051 313 aaPredicted RBP9.34□□□□□ -0.91
SF3A1-206ENST00000471037 CD38P28907 300 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 EPHA8P29322 1005 aaPredicted RBP9.34□□□□□ -0.91
SF3A1-206ENST00000471037 ACADVLP49748 655 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 RPS24P62847 133 aaKnown RBP9.34□□□□□ -0.91
SF3A1-206ENST00000471037 NOMO3P69849 1222 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 CENPCQ03188 943 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 CDH18Q13634 790 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 CCDC157Q569K6 752 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 MS4A13Q5J8X5 152 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 PITRM1Q5JRX3 1037 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 CCDC122Q5T0U0 273 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 C6orf118Q5T5N4 469 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 C9orf64Q5T6V5 341 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 NAA35Q5VZE5 725 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 ZSCAN30Q86W11 494 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 GATAD2AQ86YP4 633 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 MSANTD4Q8NCY6 345 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 ACRBPQ8NEB7 543 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 FAM131CQ96AQ9 280 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 SLC39A13Q96H72 371 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 CRELD1Q96HD1 420 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 CNDP2Q96KP4 475 aaKnown RBP9.34□□□□□ -0.91
SF3A1-206ENST00000471037 FCRL2Q96LA5 508 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms