RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 THEGLP0DJG4 465 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 CD70P32970 193 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 HOXD13P35453 343 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 AFMP43652 599 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 CCDC15Q0P6D6 951 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 KCNMA1Q12791 1236 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 CLN3Q13286 438 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 LINC00303Q3SY05 128 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 FAM46CQ5VWP2 391 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 FOXR1Q6PIV2 292 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 RBM44Q6ZP01 1051 aaKnown RBP9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 DSG4Q86SJ6 1040 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 TRIM69Q86WT6 500 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 DCP2Q8IU60 420 aaKnown RBP9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 C12orf56Q8IXR9 622 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 ZC3H3Q8IXZ2 948 aaKnown RBP9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 GOLGA5Q8TBA6 731 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 FAM174AQ8TBP5 190 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 PARD3BQ8TEW8 1205 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 DHX58Q96C10 678 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 IFT43Q96FT9 208 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 MYO19Q96H55 970 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 FAM129BQ96TA1 746 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 SRRTQ9BXP5 876 aaKnown RBP9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 MTG2Q9H4K7 406 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 ARHGAP20Q9P2F6 1191 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 HMGXB4Q9UGU5 601 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 ATXN7L1Q9ULK2 861 aaPredicted RBP9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 ERVW-1Q9UQF0 538 aa9.2□□□□□ -0.94
SYNGAP1-205ENST00000470232 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.2□□□□□ -0.944e-6■■■■■ 29.7
SYNGAP1-205ENST00000470232 FLNCQ14315 2725 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 GOLGA6L9A6NEM1 432 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 LRRIQ3A6PVS8 624 aaPredicted RBP9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 PIAS2O75928 621 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 TNFSF15O95150 251 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 VNN1O95497 513 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 ZBED1O96006 694 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 BMP6P22004 513 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 MAT2AP31153 395 aaKnown RBP9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 CSKP41240 450 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 CASP4P49662 377 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 HNRNPKP61978 463 aaKnown RBP eCLIP9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 PPP2CBP62714 309 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 PPP2CAP67775 309 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 CLDN10P78369 228 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 NFKB2Q00653 900 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 ECT2LQ008S8 904 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 TLE1Q04724 770 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 DMTNQ08495 405 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 INCA1Q0VD86 236 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 TBX2Q13207 712 aaPredicted RBP9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 ELAVL3Q14576 367 aaKnown RBP9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 CT47A1Q5JQC4 288 aaPredicted RBP9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 FAM26FQ5R3K3 315 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 PPP1R26Q5T8A7 1209 aaPredicted RBP9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 PIK3R6Q5UE93 754 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 PM20D1Q6GTS8 502 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 EPM2AIP1Q7L775 607 aaPredicted RBP9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 CLEC14AQ86T13 490 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 REXO1L1PQ8IX06 675 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 NELFCDQ8IXH7 590 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 STK40Q8N2I9 435 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 TTC39CQ8N584 583 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 AADATQ8N5Z0 425 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 HJURPQ8NCD3 748 aaPredicted RBP9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 MNS1Q8NEH6 495 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 EXTL1Q92935 676 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 GLMNQ92990 594 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 ATXN7L3BQ96GX2 97 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 HEXIM2Q96MH2 286 aaKnown RBP9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 GTPBP4Q9BZE4 634 aaKnown RBP9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 SLC25A18Q9H1K4 315 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 L2HGDHQ9H9P8 463 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 ABCC13Q9NSE7 274 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 SEPT10Q9P0V9 454 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 STIM2Q9P246 746 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 DNAI1Q9UI46 699 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 ENTPD2Q9Y5L3 495 aa9.19□□□□□ -0.94
SYNGAP1-205ENST00000470232 CCDC187A0A096LP49 1063 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 CPED1A4D0V7 1026 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 TTC34A8MYJ7 566 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 TMX2-CTNND1H3BSU7 103 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 PLRG1O43660 514 aaKnown RBP9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 TDRD6O60522 2096 aaKnown RBP9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 ASS1P00966 412 aaKnown RBP9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 ITGA2BP08514 1039 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 ZNF18P17022 549 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 ITGB6P18564 788 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 CR2P20023 1033 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 TGM2P21980 687 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 MZF1P28698 734 aaPredicted RBP9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 ERCC5P28715 1186 aaPredicted RBP9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 AKT2P31751 481 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 PIK3CAP42336 1068 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 ASPAP45381 313 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 RPIAP49247 311 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 TKTL1P51854 596 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 ETF1P62495 437 aaKnown RBP9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 CDH18Q13634 790 aa9.18□□□□□ -0.94
SYNGAP1-205ENST00000470232 ZACNQ401N2 412 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms