RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 PGAP3Q96FM1 320 aaPredicted RBP17.96■□□□□ 0.47
COL7A1-208ENST00000470076 TUBGCP2Q9BSJ2 902 aa17.96■□□□□ 0.47
COL7A1-208ENST00000470076 TKTL2Q9H0I9 626 aa17.96■□□□□ 0.47
COL7A1-208ENST00000470076 MUC3BQ9H195 1237 aa17.96■□□□□ 0.47
COL7A1-208ENST00000470076 ERVMER34-1Q9H9K5 563 aa17.96■□□□□ 0.47
COL7A1-208ENST00000470076 PLCB1Q9NQ66 1216 aa17.96■□□□□ 0.47
COL7A1-208ENST00000470076 ARHGEF38Q9NXL2 777 aa17.96■□□□□ 0.47
COL7A1-208ENST00000470076 DKK4Q9UBT3 224 aa17.96■□□□□ 0.47
COL7A1-208ENST00000470076 SARDHQ9UL12 918 aa17.96■□□□□ 0.47
COL7A1-208ENST00000470076 PPM1HQ9ULR3 514 aa17.96■□□□□ 0.47
COL7A1-208ENST00000470076 DMTF1Q9Y222 760 aa17.96■□□□□ 0.47
COL7A1-208ENST00000470076 RTN2O75298 545 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 F9P00740 461 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 ZNF18P17022 549 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 ERCC5P28715 1186 aaPredicted RBP17.95■□□□□ 0.46
COL7A1-208ENST00000470076 GABRB2P47870 512 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 METAP1P53582 386 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 NXPH1P58417 271 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 KRT83P78385 493 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 SHBQ15464 509 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 SMAD1Q15797 465 aaKnown RBP17.95■□□□□ 0.46
COL7A1-208ENST00000470076 MIIPQ5JXC2 388 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 ACBD5Q5T8D3 534 aaPredicted RBP17.95■□□□□ 0.46
COL7A1-208ENST00000470076 Q6ZVU0 165 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 IQCHQ86VS3 1027 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 GATAD2AQ86YP4 633 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 MFSD2AQ8NA29 543 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 PIP4K2CQ8TBX8 421 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 SAP25Q8TEE9 199 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 C18orf8Q96DM3 657 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 C2orf49Q9BVC5 232 aaPredicted RBP17.95■□□□□ 0.46
COL7A1-208ENST00000470076 CLSTN2Q9H4D0 955 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 ARHGAP20Q9P2F6 1191 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 DACH1Q9UI36 760 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 HS3ST2Q9Y278 367 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 PCDHGA1Q9Y5H4 931 aa17.95■□□□□ 0.46
COL7A1-208ENST00000470076 DOCK9Q9BZ29 2069 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 PLK4O00444 970 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 MAGEC1O60732 1142 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 ADCY5O95622 1261 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 RHOCP08134 193 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 CYP11B1P15538 503 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 EPHA8P29322 1005 aaPredicted RBP17.94■□□□□ 0.46
COL7A1-208ENST00000470076 SULT1E1P49888 294 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 RNASE9P60153 205 aaKnown RBP17.94■□□□□ 0.46
COL7A1-208ENST00000470076 DEUP1Q05D60 604 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 CNTN1Q12860 1018 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 OVGP1Q12889 678 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 RAPGEF1Q13905 1077 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 DRAP1Q14919 205 aaPredicted RBP17.94■□□□□ 0.46
COL7A1-208ENST00000470076 SLC25A52Q3SY17 297 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 CCDC157Q569K6 752 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 AGBL4Q5VU57 503 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 DPY19L2P1Q6NXN4 242 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 LRRC31Q6UY01 552 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 SETD3Q86TU7 594 aaPredicted RBP17.94■□□□□ 0.46
COL7A1-208ENST00000470076 TRIM69Q86WT6 500 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 MDM1Q8TC05 714 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 C1orf74Q96LT6 269 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 CCDC114Q96M63 670 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 FARP1Q9Y4F1 1045 aaPredicted RBP17.94■□□□□ 0.46
COL7A1-208ENST00000470076 ADAMTS20P59510 1910 aa17.94■□□□□ 0.46
COL7A1-208ENST00000470076 ENC1O14682 589 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 CNTN5O94779 1100 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 LDOC1O95751 146 aaPredicted RBP17.93■□□□□ 0.46
COL7A1-208ENST00000470076 CDK4P11802 303 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 SRCP12931 536 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 TFE3P19532 575 aaPredicted RBP17.93■□□□□ 0.46
COL7A1-208ENST00000470076 RXRGP48443 463 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 DPCR1Q3MIW9 517 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 SETMARQ53H47 684 aaPredicted RBP17.93■□□□□ 0.46
COL7A1-208ENST00000470076 ALFQ53S48 1182 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 FAM102AQ5T9C2 384 aaPredicted RBP17.93■□□□□ 0.46
COL7A1-208ENST00000470076 DHRS13Q6UX07 377 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 ERICH1Q86X53 443 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 ZNF683Q8IZ20 524 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 ATP11CQ8NB49 1132 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 MSANTD4Q8NCY6 345 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 CNDP2Q96KP4 475 aaKnown RBP17.93■□□□□ 0.46
COL7A1-208ENST00000470076 PREBQ9HCU5 417 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 ANLNQ9NQW6 1124 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 CHMP5Q9NZZ3 219 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 GPSM3Q9Y4H4 160 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 DOCK4Q8N1I0 1966 aa17.93■□□□□ 0.46
COL7A1-208ENST00000470076 ARID1BQ8NFD5 2236 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-208ENST00000470076 URB1O60287 2271 aaKnown RBP17.92■□□□□ 0.46
COL7A1-208ENST00000470076 TRABD2BA6NFA1 517 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 DRGXA6NNA5 263 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 I6L893 689 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-208ENST00000470076 BNIP3LO60238 219 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 LSM8O95777 96 aaKnown RBP17.92■□□□□ 0.46
COL7A1-208ENST00000470076 C1SP09871 688 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 MAT2AP31153 395 aaKnown RBP17.92■□□□□ 0.46
COL7A1-208ENST00000470076 CLCN6P51797 869 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 CCDC15Q0P6D6 951 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 KCNMA1Q12791 1236 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 CAMK2BQ13554 666 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 STAT4Q14765 748 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 POM121L1PQ3SYA9 428 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 C6orf118Q5T5N4 469 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms