RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 INO80CQ6PI98 192 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-216ENST00000469400 IGF2-ASQ6U949 168 aa13.19□□□□□ -0.3
TRAPPC12-216ENST00000469400 CIR1Q86X95 450 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-216ENST00000469400 CCAR2Q8N163 923 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-216ENST00000469400 OR13H1Q8NG92 308 aa13.19□□□□□ -0.3
TRAPPC12-216ENST00000469400 MAPK15Q8TD08 544 aa13.19□□□□□ -0.3
TRAPPC12-216ENST00000469400 FAM149B1Q96BN6 582 aa13.19□□□□□ -0.3
TRAPPC12-216ENST00000469400 BTN2A3PQ96KV6 586 aa13.19□□□□□ -0.3
TRAPPC12-216ENST00000469400 SLC46A1Q96NT5 459 aa13.19□□□□□ -0.3
TRAPPC12-216ENST00000469400 CALN1Q9BXU9 219 aa13.19□□□□□ -0.3
TRAPPC12-216ENST00000469400 FZD3Q9NPG1 666 aa13.19□□□□□ -0.3
TRAPPC12-216ENST00000469400 SATB2Q9UPW6 733 aa13.19□□□□□ -0.3
TRAPPC12-216ENST00000469400 PCDHB4Q9Y5E5 795 aa13.19□□□□□ -0.3
TRAPPC12-216ENST00000469400 NEMP2A6NFY4 417 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 F5H5T6 163 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 K7ESM1 405 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 SCAMP1O15126 338 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 ALOX15BO15296 676 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 LZTS3O60299 673 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 ZNF18P17022 549 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 RBMS1P29558 406 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 AKT2P31751 481 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 SYKP43405 635 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 DUSP3P51452 185 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 CLDN2P57739 230 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 SKOR1P84550 965 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 STILQ15468 1287 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 DLG2Q15700 870 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 ZNF284Q2VY69 593 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 C3orf38Q5JPI3 329 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 PIP5KL1Q5T9C9 394 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 CXorf57Q6NSI4 855 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 NEK5Q6P3R8 708 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 Q6ZVU0 165 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 SMYD4Q8IYR2 804 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 SLC22A18ASQ8N1D0 253 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 IFI44Q8TCB0 444 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 ERCC4Q92889 916 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 ALG14Q96F25 216 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 NOX5Q96PH1 765 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 DUSP23Q9BVJ7 150 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 USP29Q9HBJ7 922 aa13.18□□□□□ -0.3
TRAPPC12-216ENST00000469400 SART1O43290 800 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 NEBLO76041 1014 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 TGM2P21980 687 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 HNRNPA2B1P22626 353 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 RPL34P49207 117 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 NDUFA8P51970 172 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 OXCT1P55809 520 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 ZNF542PQ5EBM4 170 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 BEND5Q7L4P6 421 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 HORMAD1Q86X24 394 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 IFT43Q96FT9 208 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 ATXN7L3BQ96GX2 97 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 PRMT1Q99873 361 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 FEM1AQ9BSK4 669 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 ST7Q9NRC1 585 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 EVA1BQ9NVM1 165 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 DNAJC28Q9NX36 388 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 SLC25A13Q9UJS0 675 aa13.17□□□□□ -0.3
TRAPPC12-216ENST00000469400 NYNRINQ9P2P1 1898 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 TCAF2A6NFQ2 919 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 KCNU1A8MYU2 1149 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 SLC16A3O15427 465 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 BNIP3LO60238 219 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 TRUB2O95900 331 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 IGLV3-25P01717 112 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 CTSLP07711 333 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 GPD2P43304 727 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 CSRP3P50461 194 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 PITX1P78337 314 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 PKP1Q13835 747 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 CDKN3Q16667 212 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 TTC39BQ5VTQ0 682 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 CCDC81Q6ZN84 652 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 GCNT7Q6ZNI0 430 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 Q6ZSR6 202 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 PRICKLE2Q7Z3G6 844 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 ABI3BPQ7Z7G0 1075 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 SH2D3CQ8N5H7 860 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 ATP6V0D2Q8N8Y2 350 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 OR52K2Q8NGK3 314 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 KAT5Q92993 513 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 SLC35C1Q96A29 364 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 GRAMD1AQ96CP6 724 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 CCDC97Q96F63 343 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 PRR11Q96HE9 360 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 PPP1R9BQ96SB3 815 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 TRIM62Q9BVG3 475 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 SLC12A6Q9UHW9 1150 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 PCDHGA8Q9Y5G5 932 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 ENTPD2Q9Y5L3 495 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 OR51B4Q9Y5P0 310 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 PTPN13Q12923 2485 aa13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 TDRD6O60522 2096 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-216ENST00000469400 FAM237AA0A1B0GTK4 181 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 CPED1A4D0V7 1026 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 PMS2P1A4D2B8 440 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 CDRT15L2A8MXV6 281 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 KPNA3O00505 521 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms