RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ELF4Q99607 663 aaPredicted RBP25.15■■□□□ 1.62
PTCH1-210ENST00000468211 ARHGAP20Q9P2F6 1191 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 PPM1HQ9ULR3 514 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 NBEAQ8NFP9 2946 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TNFSF14O43557 240 aa25.14■■□□□ 1.62
PTCH1-210ENST00000468211 LATO43561 262 aa25.14■■□□□ 1.62
PTCH1-210ENST00000468211 SNAP91O60641 907 aa25.14■■□□□ 1.62
PTCH1-210ENST00000468211 CDH4P55283 916 aa25.14■■□□□ 1.62
PTCH1-210ENST00000468211 BPIFB4P59827 614 aa25.14■■□□□ 1.62
PTCH1-210ENST00000468211 CNTN1Q12860 1018 aa25.14■■□□□ 1.62
PTCH1-210ENST00000468211 XYLT1Q86Y38 959 aa25.14■■□□□ 1.62
PTCH1-210ENST00000468211 ZDHHC17Q8IUH5 632 aa25.14■■□□□ 1.62
PTCH1-210ENST00000468211 WDCPQ9H6R7 721 aa25.14■■□□□ 1.62
PTCH1-210ENST00000468211 ARID1BQ8NFD5 2236 aaPredicted RBP25.14■■□□□ 1.61
PTCH1-210ENST00000468211 ITPR1Q14643 2758 aa25.14■■□□□ 1.61
PTCH1-210ENST00000468211 K7ERQ8 282 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 CBX4O00257 560 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 BNIP3LO60238 219 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 DFNA5O60443 496 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 SRCP12931 536 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 MAT2AP31153 395 aaKnown RBP25.13■■□□□ 1.61
PTCH1-210ENST00000468211 MTA1Q13330 715 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 CCDC157Q569K6 752 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 BRMS1LQ5PSV4 323 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 AGBL4Q5VU57 503 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 NOP9Q86U38 636 aaKnown RBP25.13■■□□□ 1.61
PTCH1-210ENST00000468211 PIP4K2CQ8TBX8 421 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 C18orf8Q96DM3 657 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 PGAP3Q96FM1 320 aaPredicted RBP25.13■■□□□ 1.61
PTCH1-210ENST00000468211 PPP1R9BQ96SB3 815 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 MUC3BQ9H195 1237 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 PDCL3Q9H2J4 239 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 RRN3Q9NYV6 651 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 MPP6Q9NZW5 540 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 APC2O95996 2303 aa25.13■■□□□ 1.61
PTCH1-210ENST00000468211 ADAMTS20P59510 1910 aa25.12■■□□□ 1.61
PTCH1-210ENST00000468211 RNF103O00237 685 aa25.12■■□□□ 1.61
PTCH1-210ENST00000468211 PES1O00541 588 aaKnown RBP25.12■■□□□ 1.61
PTCH1-210ENST00000468211 MCF2LO15068 1137 aa25.12■■□□□ 1.61
PTCH1-210ENST00000468211 PLRG1O43660 514 aaKnown RBP25.12■■□□□ 1.61
PTCH1-210ENST00000468211 CTSLP07711 333 aa25.12■■□□□ 1.61
PTCH1-210ENST00000468211 FLT3P36888 993 aa25.12■■□□□ 1.61
PTCH1-210ENST00000468211 DEUP1Q05D60 604 aa25.12■■□□□ 1.61
PTCH1-210ENST00000468211 FAM102AQ5T9C2 384 aaPredicted RBP25.12■■□□□ 1.61
PTCH1-210ENST00000468211 LRSAM1Q6UWE0 723 aa25.12■■□□□ 1.61
PTCH1-210ENST00000468211 DSG4Q86SJ6 1040 aa25.12■■□□□ 1.61
PTCH1-210ENST00000468211 MDM1Q8TC05 714 aa25.12■■□□□ 1.61
PTCH1-210ENST00000468211 STAP1Q9ULZ2 295 aa25.12■■□□□ 1.61
PTCH1-210ENST00000468211 HS3ST2Q9Y278 367 aa25.12■■□□□ 1.61
PTCH1-210ENST00000468211 ACACAQ13085 2346 aa25.12■■□□□ 1.61
PTCH1-210ENST00000468211 CELSR3Q9NYQ7 3312 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 A0A0D9SEW6 157 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 FAM149AA5PLN7 773 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 DRGXA6NNA5 263 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 SMAD6O43541 496 aaKnown RBP25.11■■□□□ 1.61
PTCH1-210ENST00000468211 RHOCP08134 193 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 MMEP08473 750 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 UCHL3P15374 230 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 NXPH1P58417 271 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 SLC25A52Q3SY17 297 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 ERICH1Q86X53 443 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 SPATS2Q86XZ4 545 aaKnown RBP25.11■■□□□ 1.61
PTCH1-210ENST00000468211 SAP25Q8TEE9 199 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 NUP62CLQ9H1M0 184 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 FTSJ1Q9UET6 329 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 VPS51Q9UID3 782 aa25.11■■□□□ 1.61
PTCH1-210ENST00000468211 GOLGA8SH3BPF8 625 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 TLR4O00206 839 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 ALOX15BO15296 676 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 SLC7A4O43246 635 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 ZNF18P17022 549 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 SCNN1AP37088 669 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 TAS2R38P59533 333 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 TCP11X2Q5H9J9 407 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 FAM46CQ5VWP2 391 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 NAPEPLDQ6IQ20 393 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 TFAP2DQ7Z6R9 452 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 CPA5Q8WXQ8 436 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 SKA1Q96BD8 255 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 KDM4CQ9H3R0 1056 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 CCDC86Q9H6F5 360 aaKnown RBP25.1■■□□□ 1.61
PTCH1-210ENST00000468211 GDF3Q9NR23 364 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 TAB2Q9NYJ8 693 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 TMEM59LQ9UK28 342 aa25.1■■□□□ 1.61
PTCH1-210ENST00000468211 CACNA1GO43497 2377 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 F8VZ95 297 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 GLDCP23378 1020 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 RRM1P23921 792 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 BNIP3Q12983 259 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 RAB6CQ53S08 254 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 DHRS13Q6UX07 377 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 LINGO4Q6UY18 593 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 BNIPLQ7Z465 357 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 PRPF39Q86UA1 669 aaKnown RBP25.09■■□□□ 1.61
PTCH1-210ENST00000468211 OR2A12Q8NGT7 310 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 EPS8L1Q8TE68 723 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 SLC20A1Q8WUM9 679 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 CFAP57Q96MR6 1250 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 RAB6CQ9H0N0 254 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 DACH1Q9UI36 760 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms