RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ADCY2Q08462 1091 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 KLF1Q13351 362 aaPredicted RBP15.55■□□□□ 0.08
SNIP1-202ENST00000468040 CCINQ13939 588 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 UBXN2BQ14CS0 331 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 PDK1Q15118 436 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 TRIM67Q6ZTA4 783 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 SYNPOQ8N3V7 929 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 MAIP1Q8WWC4 291 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 NAP1L3Q99457 506 aaPredicted RBP15.55■□□□□ 0.08
SNIP1-202ENST00000468040 HERPUD2Q9BSE4 406 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 OSBPL6Q9BZF3 934 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 BRD8Q9H0E9 1235 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 MFSD1Q9H3U5 465 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 SP110Q9HB58 689 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 VPS51Q9UID3 782 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 SLC25A13Q9UJS0 675 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 TTC7AQ9ULT0 858 aaPredicted RBP15.55■□□□□ 0.08
SNIP1-202ENST00000468040 PLA2G4CQ9UP65 541 aa15.55■□□□□ 0.08
SNIP1-202ENST00000468040 STK25O00506 426 aa15.54■□□□□ 0.08
SNIP1-202ENST00000468040 FANCGO15287 622 aa15.54■□□□□ 0.08
SNIP1-202ENST00000468040 FGGP02679 453 aa15.54■□□□□ 0.08
SNIP1-202ENST00000468040 SRPRAP08240 638 aaKnown RBP15.54■□□□□ 0.08
SNIP1-202ENST00000468040 PECAM1P16284 738 aaPredicted RBP15.54■□□□□ 0.08
SNIP1-202ENST00000468040 TARSP26639 723 aaKnown RBP15.54■□□□□ 0.08
SNIP1-202ENST00000468040 NNMTP40261 264 aa15.54■□□□□ 0.08
SNIP1-202ENST00000468040 GARSP41250 739 aaKnown RBP15.54■□□□□ 0.08
SNIP1-202ENST00000468040 VASPP50552 380 aaPredicted RBP15.54■□□□□ 0.08
SNIP1-202ENST00000468040 ZNF33AQ06730 810 aa15.54■□□□□ 0.08
SNIP1-202ENST00000468040 SLC20A2Q08357 652 aa15.54■□□□□ 0.08
SNIP1-202ENST00000468040 TIGD7Q6NT04 549 aaPredicted RBP15.54■□□□□ 0.08
SNIP1-202ENST00000468040 TRMT11Q7Z4G4 463 aaKnown RBP15.54■□□□□ 0.08
SNIP1-202ENST00000468040 METTL3Q86U44 580 aaKnown RBP15.54■□□□□ 0.08
SNIP1-202ENST00000468040 ZNF687Q8N1G0 1237 aa15.54■□□□□ 0.08
SNIP1-202ENST00000468040 RASGEF1CQ8N431 466 aa15.54■□□□□ 0.08
SNIP1-202ENST00000468040 KDM1BQ8NB78 822 aa15.54■□□□□ 0.08
SNIP1-202ENST00000468040 EZH1Q92800 747 aaPredicted RBP15.54■□□□□ 0.08
SNIP1-202ENST00000468040 HDAC11Q96DB2 347 aa15.54■□□□□ 0.08
SNIP1-202ENST00000468040 OLFM3Q96PB7 478 aa15.54■□□□□ 0.08
SNIP1-202ENST00000468040 IPO11Q9UI26 975 aaKnown RBP15.54■□□□□ 0.08
SNIP1-202ENST00000468040 FAM170BA6NMN3 283 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 PGRMC1O00264 195 aaKnown RBP15.53■□□□□ 0.08
SNIP1-202ENST00000468040 SNAP91O60641 907 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 PRAMEF11O60813 436 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 ZMPSTE24O75844 475 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 CHRNB1P11230 501 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 HNRNPLP14866 589 aaKnown RBP eCLIP15.53■□□□□ 0.08
SNIP1-202ENST00000468040 GLDCP23378 1020 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 KIR2DL1P43626 348 aaPredicted RBP15.53■□□□□ 0.08
SNIP1-202ENST00000468040 CLCN6P51797 869 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 ST8SIA6P61647 398 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 MRPS21P82921 87 aaKnown RBP15.53■□□□□ 0.08
SNIP1-202ENST00000468040 ARF5P84085 180 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 IL10RBQ08334 325 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 SLC10A2Q12908 348 aaPredicted RBP15.53■□□□□ 0.08
SNIP1-202ENST00000468040 XRCC4Q13426 336 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 NOMO1Q15155 1222 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 LONRF2Q1L5Z9 754 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 HSF5Q4G112 596 aaPredicted RBP15.53■□□□□ 0.08
SNIP1-202ENST00000468040 NPNTQ6UXI9 565 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 SFTPA1Q8IWL2 248 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 TP53INP2Q8IXH6 220 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 ZNF513Q8N8E2 541 aaPredicted RBP15.53■□□□□ 0.08
SNIP1-202ENST00000468040 NETO2Q8NC67 525 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 PJA1Q8NG27 643 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 ACTL9Q8TC94 416 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 ACTRT1Q8TDG2 376 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 COG1Q8WTW3 980 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 CYB5D2Q8WUJ1 264 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 NSMCE1Q8WV22 266 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 CASKIN2Q8WXE0 1202 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 SORCS1Q8WY21 1168 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 FATE1Q969F0 183 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 HAUS1Q96CS2 278 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 TSGA13Q96PP4 275 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 FRMD8P1Q9BZ68 369 aaPredicted RBP15.53■□□□□ 0.08
SNIP1-202ENST00000468040 FOXQ1Q9C009 403 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 PDFQ9HBH1 243 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 SAE1Q9UBE0 346 aaPredicted RBP15.53■□□□□ 0.08
SNIP1-202ENST00000468040 SLC8A2Q9UPR5 921 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 ERVW-1Q9UQF0 538 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 HS3ST2Q9Y278 367 aa15.53■□□□□ 0.08
SNIP1-202ENST00000468040 F5P12259 2224 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 TMEM221A6NGB7 291 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 HACD1B0YJ81 288 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 M0R296 226 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 MCF2LO15068 1137 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 MAFKO60675 156 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 ZNF189O75820 626 aaPredicted RBP15.52■□□□□ 0.08
SNIP1-202ENST00000468040 MAP3K6O95382 1288 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 CCNCP24863 283 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 CTSOP43234 321 aaPredicted RBP15.52■□□□□ 0.08
SNIP1-202ENST00000468040 NUMBP49757 651 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 SERPINH1P50454 418 aaKnown RBP15.52■□□□□ 0.08
SNIP1-202ENST00000468040 SEC13P55735 322 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 OTUD4Q01804 1114 aaKnown RBP15.52■□□□□ 0.08
SNIP1-202ENST00000468040 PPIDQ08752 370 aaKnown RBP15.52■□□□□ 0.08
SNIP1-202ENST00000468040 RFTN1Q14699 578 aaPredicted RBP15.52■□□□□ 0.08
SNIP1-202ENST00000468040 PTPRNQ16849 979 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 FNDC3BQ53EP0 1204 aaKnown RBP15.52■□□□□ 0.08
SNIP1-202ENST00000468040 INO80DQ53TQ3 878 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms