RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 REEP2Q9BRK0 252 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 EFHD1Q9BUP0 239 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 LRRN3Q9H3W5 708 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 FZD3Q9NPG1 666 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 SPASTQ9UBP0 616 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 STRIP2Q9ULQ0 834 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 PCDHA5Q9Y5H7 936 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 TRPM6Q9BX84 2022 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 SPTY2D1-AS1A0A0U1RR47 76 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 A0A1W2PQM1 296 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 ANXA6P08133 673 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 SRPRAP08240 638 aaKnown RBP12.05□□□□□ -0.48
VPS26A-204ENST00000467852 UGT1A3P35503 534 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 CSKP41240 450 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 RECQLP46063 649 aaPredicted RBP12.05□□□□□ -0.48
VPS26A-204ENST00000467852 ZNF131P52739 623 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 ZFP36L1Q07352 338 aaKnown RBP12.05□□□□□ -0.48
VPS26A-204ENST00000467852 ELAVL3Q14576 367 aaKnown RBP12.05□□□□□ -0.48
VPS26A-204ENST00000467852 DUOXA2Q1HG44 320 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 WDR72Q3MJ13 1102 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 TTC38Q5R3I4 469 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 FAM46CQ5VWP2 391 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 OR6B2Q6IFH4 312 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 CCDC74AQ96AQ1 378 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 KIAA1143Q96AT1 154 aaPredicted RBP12.05□□□□□ -0.48
VPS26A-204ENST00000467852 PLD4Q96BZ4 506 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 MRGPRX3Q96LB0 322 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 CSNK1G1Q9HCP0 422 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 CLIC5Q9NZA1 410 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 GULP1Q9UBP9 304 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 ERVW-1Q9UQF0 538 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 DAAM1Q9Y4D1 1078 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 KCTD3Q9Y597 815 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 HS3ST3A1Q9Y663 406 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 CYP46A1Q9Y6A2 500 aa12.05□□□□□ -0.48
VPS26A-204ENST00000467852 TACC2O95359 2948 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 A0A1W2PQU0 124 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 JAK2O60674 1132 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 KRT18P05783 430 aaKnown RBP12.04□□□□□ -0.48
VPS26A-204ENST00000467852 OAS2P29728 719 aaKnown RBP12.04□□□□□ -0.48
VPS26A-204ENST00000467852 ADKP55263 362 aaKnown RBP12.04□□□□□ -0.48
VPS26A-204ENST00000467852 RNF219Q5W0B1 726 aaPredicted RBP12.04□□□□□ -0.48
VPS26A-204ENST00000467852 CEP135Q66GS9 1140 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 NEK5Q6P3R8 708 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 GCNT7Q6ZNI0 430 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 FUKQ8N0W3 1084 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 C4orf32Q8N8J7 132 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 ZSWIM2Q8NEG5 633 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 OR5B17Q8NGF7 314 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 CDK5RAP3Q96JB5 506 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 TAAR9Q96RI9 348 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 PLIN2Q99541 437 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 MMTAG2Q9BU76 263 aaKnown RBP12.04□□□□□ -0.48
VPS26A-204ENST00000467852 GPN2Q9H9Y4 310 aaPredicted RBP12.04□□□□□ -0.48
VPS26A-204ENST00000467852 MARCH2Q9P0N8 246 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 RABGEF1Q9UJ41 708 aa12.04□□□□□ -0.48
VPS26A-204ENST00000467852 GOLGA8IPA6NC78 632 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 GOLGA8JA6NMD2 632 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 PPP1R3GB7ZBB8 358 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 LMO7DNF2Z398 122 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 SLFN14P0C7P3 912 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 FDPSP14324 419 aaKnown RBP12.03□□□□□ -0.48
VPS26A-204ENST00000467852 VARSP26640 1264 aaKnown RBP12.03□□□□□ -0.48
VPS26A-204ENST00000467852 METAP1P53582 386 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 CNTN1Q12860 1018 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 SURF1Q15526 300 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 TESK1Q15569 626 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 HYIQ5T013 277 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 PHF19Q5T6S3 580 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 AGBL4Q5VU57 503 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 DMRTA1Q5VZB9 504 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 C16orf46Q6P387 395 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 GPRIN1Q7Z2K8 1008 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 GDF7Q7Z4P5 450 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 OR6C4Q8NGE1 309 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 WFDC5Q8TCV5 224 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 JAKMIP2Q96AA8 810 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 SPAG5Q96R06 1193 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 FIZ1Q96SL8 496 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 IKZF4Q9H2S9 585 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 ST6GALNAC4Q9H4F1 302 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 MAP10Q9P2G4 905 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 KLF15Q9UIH9 416 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 EXOC7Q9UPT5 735 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 CEP83Q9Y592 693 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 KCNMB2Q9Y691 235 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 ITIH6Q6UXX5 1313 aa12.03□□□□□ -0.48
VPS26A-204ENST00000467852 TNRC6AQ8NDV7 1962 aaKnown RBP12.02□□□□□ -0.49
VPS26A-204ENST00000467852 RAD1O60671 282 aa12.02□□□□□ -0.49
VPS26A-204ENST00000467852 TBCAO75347 108 aaKnown RBP12.02□□□□□ -0.49
VPS26A-204ENST00000467852 FAM155BO75949 473 aa12.02□□□□□ -0.49
VPS26A-204ENST00000467852 CTDNEP1O95476 244 aa12.02□□□□□ -0.49
VPS26A-204ENST00000467852 TCN2P20062 427 aa12.02□□□□□ -0.49
VPS26A-204ENST00000467852 NNMTP40261 264 aa12.02□□□□□ -0.49
VPS26A-204ENST00000467852 PRSS12P56730 875 aa12.02□□□□□ -0.49
VPS26A-204ENST00000467852 LSM11P83369 360 aaKnown RBP eCLIP12.02□□□□□ -0.49
VPS26A-204ENST00000467852 C1orf61Q13536 156 aa12.02□□□□□ -0.49
VPS26A-204ENST00000467852 INPP5JQ15735 1006 aaPredicted RBP12.02□□□□□ -0.49
VPS26A-204ENST00000467852 ZNF284Q2VY69 593 aa12.02□□□□□ -0.49
VPS26A-204ENST00000467852 PRRT3Q5FWE3 981 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms