RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 PXNP49023 591 aaPredicted RBP11.31□□□□□ -0.6
MSH5-212ENST00000467319 NUMBP49757 651 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 CLCN6P51797 869 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 YBEYP58557 167 aaPredicted RBP11.31□□□□□ -0.6
MSH5-212ENST00000467319 DPYSL3Q14195 570 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 HADHQ16836 314 aaKnown RBP11.31□□□□□ -0.6
MSH5-212ENST00000467319 HEATR6Q6AI08 1181 aaKnown RBP11.31□□□□□ -0.6
MSH5-212ENST00000467319 SDE2Q6IQ49 451 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 SH2D3CQ8N5H7 860 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 ZNF366Q8N895 744 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 TPCN2Q8NHX9 752 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 HMGB4Q8WW32 186 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 HMCESQ96FZ2 354 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 PDLIM2Q96JY6 352 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 ZNF670Q9BS34 389 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 EPC1Q9H2F5 836 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 GOLPH3Q9H4A6 298 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 ATP13A1Q9HD20 1204 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 PRSS16Q9NQE7 514 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 FAM86C1Q9NVL1 165 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 SLCO3A1Q9UIG8 710 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 SLC25A13Q9UJS0 675 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 R4GN57 208 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 ZNF292O60281 2723 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 GVINP1Q7Z2Y8 2422 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 A0A0U1RQJ8 604 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 EDDM13A0A1B0GTR0 161 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 C3orf70A6NLC5 250 aaPredicted RBP11.3□□□□□ -0.6
MSH5-212ENST00000467319 PSTPIP1O43586 416 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 SIN3BO75182 1162 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 ALDH1A2O94788 518 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 CD160O95971 181 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 MT-CO1P00395 513 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 IGLV3-19P01714 112 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 CD48P09326 243 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 VAV1P15498 845 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 CNR2P34972 360 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 ARL4AP40617 200 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 P2RY2P41231 377 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 SERPINH1P50454 418 aaKnown RBP11.3□□□□□ -0.6
MSH5-212ENST00000467319 NDST2P52849 883 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 CDH6P55285 790 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 ST8SIA6P61647 398 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 KRT83P78385 493 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 SERINC3Q13530 473 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 POLD3Q15054 466 aaPredicted RBP11.3□□□□□ -0.6
MSH5-212ENST00000467319 MAP7D1Q3KQU3 841 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 C9orf64Q5T6V5 341 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 METTL3Q86U44 580 aaKnown RBP11.3□□□□□ -0.6
MSH5-212ENST00000467319 VSIG1Q86XK7 387 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 LRRC8AQ8IWT6 810 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 LRRC57Q8N9N7 239 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 OR2T3Q8NH03 318 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 GAB3Q8WWW8 586 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 ATRIPQ8WXE1 791 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 ATOH1Q92858 354 aaPredicted RBP11.3□□□□□ -0.6
MSH5-212ENST00000467319 CALR3Q96L12 384 aaKnown RBP11.3□□□□□ -0.6
MSH5-212ENST00000467319 RPL10LQ96L21 214 aaKnown RBP11.3□□□□□ -0.6
MSH5-212ENST00000467319 TPSD1Q9BZJ3 242 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 SLC6A17Q9H1V8 727 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 RSPH9Q9H1X1 276 aaPredicted RBP11.3□□□□□ -0.6
MSH5-212ENST00000467319 MTG2Q9H4K7 406 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 PDFQ9HBH1 243 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 KLHL11Q9NVR0 708 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 DONSONQ9NYP3 566 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 USP36Q9P275 1121 aaKnown RBP11.3□□□□□ -0.6
MSH5-212ENST00000467319 MFHAS1Q9Y4C4 1052 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 ADGRG1Q9Y653 693 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 DUSP10Q9Y6W6 482 aa11.3□□□□□ -0.6
MSH5-212ENST00000467319 ZFHX2Q9C0A1 2572 aaPredicted RBP11.29□□□□□ -0.6
MSH5-212ENST00000467319 TARSL2A2RTX5 802 aaKnown RBP11.29□□□□□ -0.6
MSH5-212ENST00000467319 RASA4BC9J798 803 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 K7ERQ8 282 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 CBX4O00257 560 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 RASA4O43374 803 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 HRO43593 1189 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 SYNCRIPO60506 623 aaKnown RBP11.29□□□□□ -0.6
MSH5-212ENST00000467319 ZNF821O75541 412 aaPredicted RBP11.29□□□□□ -0.6
MSH5-212ENST00000467319 COMTP21964 271 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 GJC1P36383 396 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 SSR1P43307 286 aaKnown RBP11.29□□□□□ -0.6
MSH5-212ENST00000467319 SRSF5Q13243 272 aaKnown RBP11.29□□□□□ -0.6
MSH5-212ENST00000467319 ELAVL3Q14576 367 aaKnown RBP11.29□□□□□ -0.6
MSH5-212ENST00000467319 PDK2Q15119 407 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 TAZQ16635 292 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 ATP13A4Q4VNC1 1196 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 RETSATQ6NUM9 610 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 C22orf39Q6P5X5 142 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 LINGO4Q6UY18 593 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 Q6ZVU0 165 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 PCDH19Q8TAB3 1148 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 RAPGEF5Q92565 580 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 PTPRN2Q92932 1015 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 CEP44Q9C0F1 390 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 ETNK2Q9NVF9 386 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 TRIM10Q9UDY6 481 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 HYOU1Q9Y4L1 999 aa11.29□□□□□ -0.6
MSH5-212ENST00000467319 GRID2IPA4D2P6 1211 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 ZSCAN5CA6NGD5 496 aaPredicted RBP11.28□□□□□ -0.6
MSH5-212ENST00000467319 ALOX15BO15296 676 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms