RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 SF3A3Q12874 501 aaKnown RBP eCLIP3.95□□□□□ -1.78
CCDC58-203ENST00000466854 SEMA3AQ14563 771 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 ZACNQ401N2 412 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 FAM133BQ5BKY9 247 aaKnown RBP3.95□□□□□ -1.78
CCDC58-203ENST00000466854 PLBD1Q6P4A8 553 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 KLHL17Q6TDP4 642 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 SLC39A5Q6ZMH5 540 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 C1orf122Q6ZSJ8 110 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 B4GALNT4Q76KP1 1039 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 RPAINQ86UA6 219 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 PIM3Q86V86 326 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 RFX6Q8HWS3 928 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 MMP21Q8N119 569 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 NDUFAF2Q8N183 169 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 ENAHQ8N8S7 591 aaPredicted RBP3.95□□□□□ -1.78
CCDC58-203ENST00000466854 SPATA3Q8NHX4 192 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 MPLKIPQ8TAP9 179 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 FAM71BQ8TC56 605 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 POF1BQ8WVV4 589 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 LTV1Q96GA3 475 aaPredicted RBP3.95□□□□□ -1.78
CCDC58-203ENST00000466854 PAAF1Q9BRP4 392 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 ANP32EQ9BTT0 268 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 MECRQ9BV79 373 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 CXorf56Q9H5V9 222 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 SIGLEC1Q9BZZ2 1709 aa3.95□□□□□ -1.78
CCDC58-203ENST00000466854 TRIP12Q14669 1992 aaPredicted RBP3.94□□□□□ -1.78
CCDC58-203ENST00000466854 FRMPD1Q5SYB0 1578 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 C19orf81C9J6K1 198 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 F8W810 466 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 CHL1O00533 1208 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 DHHO43323 396 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 HSP90AB1P08238 724 aaKnown RBP3.94□□□□□ -1.78
CCDC58-203ENST00000466854 ITGA2BP08514 1039 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 RFPL3SP0C7P2 107 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 DDIT3P35638 169 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 SOX2P48431 317 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 TAS2R50P59544 299 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 RPL15P61313 204 aaKnown RBP3.94□□□□□ -1.78
CCDC58-203ENST00000466854 DMWDQ09019 674 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 DDX10Q13206 875 aaKnown RBP3.94□□□□□ -1.78
CCDC58-203ENST00000466854 PTK2BQ14289 1009 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 GLIPR1L2Q4G1C9 344 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 CCDC38Q502W7 563 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 SPECC1Q5M775 1068 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 UBAP2Q5T6F2 1119 aaKnown RBP3.94□□□□□ -1.78
CCDC58-203ENST00000466854 JAKMIP3Q5VZ66 844 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 MZT2BQ6NZ67 158 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 ZNF549Q6P9A3 640 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 LMNTD2Q8IXW0 634 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 OR8H2Q8N162 312 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 CHCHD4Q8N4Q1 142 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 RBMXL3Q8N7X1 1067 aaKnown RBP3.94□□□□□ -1.78
CCDC58-203ENST00000466854 ARL14EPQ8N8R7 260 aaPredicted RBP3.94□□□□□ -1.78
CCDC58-203ENST00000466854 SMRP1Q8NCR6 262 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 ADPRHL1Q8NDY3 354 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 APPL2Q8NEU8 664 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 CENPOQ9BU64 300 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 TUBB6Q9BUF5 446 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 HTATIP2Q9BUP3 242 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 SORBS1Q9BX66 1292 aaKnown RBP3.94□□□□□ -1.78
CCDC58-203ENST00000466854 TMEM120AQ9BXJ8 343 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 HIPK2Q9H2X6 1198 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 TP63Q9H3D4 680 aaPredicted RBP3.94□□□□□ -1.78
CCDC58-203ENST00000466854 AAMDCQ9H7C9 122 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 SFXN1Q9H9B4 322 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 SEPSECSQ9HD40 501 aaKnown RBP3.94□□□□□ -1.78
CCDC58-203ENST00000466854 SEMA4BQ9NPR2 832 aaPredicted RBP3.94□□□□□ -1.78
CCDC58-203ENST00000466854 SMYD2Q9NRG4 433 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 DACT1Q9NYF0 836 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 WWOXQ9NZC7 414 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 UTS2RQ9UKP6 389 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 NFU1Q9UMS0 254 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 COG5Q9UP83 839 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 DGKBQ9Y6T7 804 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 ERICH3Q5RHP9 1530 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 MAGI3Q5TCQ9 1506 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 FHAD1B1AJZ9 1412 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 SPATA31A5Q5VU36 1347 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 SPATA31A7Q8IWB4 1347 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 EVPLQ92817 2033 aa3.94□□□□□ -1.78
CCDC58-203ENST00000466854 LOC105369274A0A096LPK9 316 aa3.93□□□□□ -1.78
CCDC58-203ENST00000466854 LOC102723532A0A0G2JNH3 316 aa3.93□□□□□ -1.78
CCDC58-203ENST00000466854 PABPN1LA6NDY0 278 aaKnown RBP3.93□□□□□ -1.78
CCDC58-203ENST00000466854 AGAP5A6NIR3 686 aa3.93□□□□□ -1.78
CCDC58-203ENST00000466854 EFCAB8A8MWE9 144 aa3.93□□□□□ -1.78
CCDC58-203ENST00000466854 ZC3H11AO75152 810 aaKnown RBP eCLIP3.93□□□□□ -1.789e-6■■■■□ 23.7
CCDC58-203ENST00000466854 CNTN5O94779 1100 aa3.93□□□□□ -1.78
CCDC58-203ENST00000466854 LARGE1O95461 756 aa3.93□□□□□ -1.78
CCDC58-203ENST00000466854 AGR2O95994 175 aa3.93□□□□□ -1.78
CCDC58-203ENST00000466854 ALDOCP09972 364 aaKnown RBP3.93□□□□□ -1.78
CCDC58-203ENST00000466854 TGM2P21980 687 aa3.93□□□□□ -1.78
CCDC58-203ENST00000466854 PDIA3P30101 505 aaKnown RBP3.93□□□□□ -1.78
CCDC58-203ENST00000466854 PEX19P40855 299 aa3.93□□□□□ -1.78
CCDC58-203ENST00000466854 PPM1FP49593 454 aaPredicted RBP3.93□□□□□ -1.78
CCDC58-203ENST00000466854 RBM6P78332 1123 aaKnown RBP3.93□□□□□ -1.78
CCDC58-203ENST00000466854 B4GALNT1Q00973 533 aa3.93□□□□□ -1.78
CCDC58-203ENST00000466854 ROR1Q01973 937 aa3.93□□□□□ -1.78
CCDC58-203ENST00000466854 TUBB8Q3ZCM7 444 aa3.93□□□□□ -1.78
CCDC58-203ENST00000466854 MANEAQ5SRI9 462 aa3.93□□□□□ -1.78
CCDC58-203ENST00000466854 SULT6B1Q6IMI4 303 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms